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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Pte13g00565
ATGGCCGAGGCTCCAGCGAGTTCTGGTGGTGGAAGTCCCGAAAGCGGTGACCAGAGTCCTCGTTCTAATGTTCGCGAGCAAGACAGGCACCTCCCAATTGCCAACATCAGTAGGATCATGAAGAGGGCCCTACCTGTTAATGGAAAAATCGCCAAAGATGCCAAGGAGACTGTGCAGGAATGCGTGTCTGAGTTTATCAGTTTCATCACTAGCGAGGCGAGCGACAAGTGTCAGAGAGAGAAGAGGAAGACGATTAATGGTGATGATTTGCTATGGGCAATGGCTACTTTAGGTTTTGAGGATTATATCGATCCCCTCAAGATTTATCTTACCAGATACAGAGAGATGGAGGTAAGTTTCATTAAATTCTTGCATTTTCTGGGTCTAGTTGCAGCTTCTGAGACTGTAATTTTACTATACGGGTATACTATATGGTCTATGACAGGGTGA
450
0.4578
MAEAPASSGGGSPESGDQSPRSNVREQDRHLPIANISRIMKRALPVNGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEVSFIKFLHFLGLVAASETVILLYGYTIWSMTG*
150
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Pte13g00565
149
Pfam
Histone-like transcription factor (CBF/NF-Y) and archaeal histone
30
94
IPR003958
-
Pte13g00565
149
Gene3D
Histone, subunit A
17
120
IPR009072
GO:0046982
Pte13g00565
149
SUPERFAMILY
Histone-fold
27
117
IPR009072
GO:0046982
Pte13g00565
149
ProSitePatterns
NF-YB/HAP3 subunit signature.
61
77
IPR003956
GO:0005634|GO:0006355|GO:0043565
Pte13g00565
149
PANTHER
CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED
17
118
IPR027113
GO:0001228|GO:0006355|GO:0016602
Pte13g00565
149
MobiDBLite
consensus disorder prediction
1
28
-
-
Pte13g00565
149
PRINTS
CCAAT-binding transcription factor subunit A signature
77
95
-
-
Pte13g00565
149
PRINTS
CCAAT-binding transcription factor subunit A signature
58
76
-
-
Pte13g00565
149
PRINTS
CCAAT-binding transcription factor subunit A signature
96
114
-
-
Pte13g00565
149
FunFam
Nuclear transcription factor Y subunit B-3
19
125
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Pte13g00565
Pte-Chr13
4315315
4317919
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Pte13g00565
1
117
CCAAT-HAP3 Transcription Factor Family
AT2G37060
84.298
1.36e-67
201
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
NF-YB
Pte13g00565
CBFD_NFYB_HMF
3.9e-27
CL0012
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Pte13g00565
K08065
-
bvg:104884304
213.001
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