Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte13g00548 | ATGAGCGTCTTCGATATTTTGACTAGAGTCGACGCGATCTGCAAAAAGTATGACAAATACGACATTGAAAAGCAGAAGGATCTCCATGTCTCCGGCGACGATGCATTTGCTCGGCTCTACTCCATCGTTGAAGCCGACATCGAGACCGCCCTTCAGAAAGCGGAAACTGCTTCCAACGAGAAAAATAGGGCGTCAGCGGTAGCGTTGAACGCAGAGATTCGACGAATCAAGGCTCATCTGCTTGAGGAAGTCCCCAAATTGCAGAGATTGGCCGTTAAGAGGGTAAAGGGGCTTTCCACGGAAGAGCTTACAGCTCGTAATGATTTGGTCCTTGCTTTGCCCGATAGGATCCTGGCAATTCCTGATGGCACGCCTACAGCACCAAAGCAGAAAAGAGGTTGGACTGCTTCTGCTTTAAACACTGAAATCAAATTTGATTCAGATGGGCACTTTGATGATGAATATTTTCAACAATCTGAGCAGTCAAGTCAATTTAGGCAGGAATATGAAATGCGAAAAATAAAGCAGGATCAAGGCCTGGACGTGATAGCTGAAGGACTGGATACATTGAAGAACATGGCACATGATATGAATGAGGAATTAGATAGACAAGTTCCTTTGATGGATGAGATTGACACTAAAGTGGACAAGGCAGCATCTGATCTCAAGAATACCAACGGGAGACTTAAAGATACAGTTAACCAGCTTTGA | 711 | 0.4487 | MSVFDILTRVDAICKKYDKYDIEKQKDLHVSGDDAFARLYSIVEADIETALQKAETASNEKNRASAVALNAEIRRIKAHLLEEVPKLQRLAVKRVKGLSTEELTARNDLVLALPDRILAIPDGTPTAPKQKRGWTASALNTEIKFDSDGHFDDEYFQQSEQSSQFRQEYEMRKIKQDQGLDVIAEGLDTLKNMAHDMNEELDRQVPLMDEIDTKVDKAASDLKNTNGRLKDTVNQL* | 237 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte13g00548 | 236 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 170 | 232 | IPR000727 | - | |
Pte13g00548 | 236 | SUPERFAMILY | SNARE fusion complex | 163 | 230 | - | - | |
Pte13g00548 | 236 | Coils | Coil | 40 | 67 | - | - | |
Pte13g00548 | 236 | ProSitePatterns | Syntaxin / epimorphin family signature. | 176 | 215 | IPR006012 | GO:0005484|GO:0006886|GO:0016020 | |
Pte13g00548 | 236 | CDD | SNARE_Qc | 175 | 230 | - | - | |
Pte13g00548 | 236 | Gene3D | - | 170 | 231 | - | - | |
Pte13g00548 | 236 | FunFam | Putative syntaxin-71-like | 170 | 231 | - | - | |
Pte13g00548 | 236 | PANTHER | SYNTAXIN | 23 | 232 | IPR045242 | - | |
Pte13g00548 | 236 | SMART | tSNARE_6 | 165 | 232 | IPR000727 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte13g00548 | Pte-Chr13 | 4220437 | 4224140 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte13g00548 | 1 | 236 | SNARE and Associated Proteins | AT3G09740 | 76.050 | 4.81e-132 | 371 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte13g00548 | K08506 | - | vvi:100258582 | 398.667 |