Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte13g00543 | ATGGCTTGTTCTTTGTTAGCTTGTTTCTCTTCTAAAGCAGCTGTTGATGATCAGAGCAGGCATGATGAGCAAACCAATGGGAAGTTTCGAGTGTTCTCTTACCACGAACTGAAATATGCTACTGACGATTTCCATTTCTCAAACAAGGTCGGAGAAGGCGGCTTCGGCTCTGTCTACAAGGGTCAACTCCGGGACGGCACAATGGTAGCTGTGAAAGTTCTTTCTATCGAGTTGGAATCCATGCGGGGAGAGAGGGAGTTCATAGCAGAACTAGCCTCACTCTCTGATGTCAACCATGAAAATCTAGTCACTCTCAGAGGGTGTTGTGTGGAGGCTTCGACTCGATATTTGGTCTACGATTACATGGAAAACAACAGCATTTCACACACATTGTTAGGTGGAGTGGCAAACAGGACGAAATTCACATGGGAGAGAAGGCGGAAAGTGTTAATAGGAGTTGCTCGTGGATTACTCTATCTCCATGAGGGAGTTGCTCCGCGTATTTTGCACAGGGATATTAAAGCCAGCAATATACTTCTAGATCGAAATTTTACTCCAAAAGTTTCAGATTTTGGTCTAGCTAGATTGCTTAGAGATGAAAATTCTCACATTAGCACCCGGGTAGCAGGAACATTTGGCTATCTTGCTCCAGAATACGCAGTCAGTGGTCACCTAACTCGAAAATCAGATGTATATAGCTTTGGAGTACTGATCCTAGAAGTTGTCAGTGGCCAATCAGTTGTAGATATTGACGATGAATACAAAGAATGTTTCCTAGTACAGAAGGCATGGGCGGCTCACGAGGCTGATGATCTTATTAGCCTAGTAGATTCTGTTCTTAATAAGGAATTTCCAGAGCAAGAAGCTATGAAGTTGCTAAAGCTGGGCCTACTTTGCGTGCAAGAAACCAGCAGGCTACGGCCGAAGATATCCTTGGCTTTGGAGATATTGACCAACACAGTGGATATGACAGATACTGTGATAACGAGACCTGGAATTGTTTCTGATTTTATGAAAATAAAAATGGGGCGCAGGCCTTTAGAACAACTCCAGGAATCAAGCTCCGGTGAAGTAAATTACTCAACCTTTTGGAGTTCAGCCAATGCCGGCCGTTAA | 1116 | 0.4391 | MACSLLACFSSKAAVDDQSRHDEQTNGKFRVFSYHELKYATDDFHFSNKVGEGGFGSVYKGQLRDGTMVAVKVLSIELESMRGEREFIAELASLSDVNHENLVTLRGCCVEASTRYLVYDYMENNSISHTLLGGVANRTKFTWERRRKVLIGVARGLLYLHEGVAPRILHRDIKASNILLDRNFTPKVSDFGLARLLRDENSHISTRVAGTFGYLAPEYAVSGHLTRKSDVYSFGVLILEVVSGQSVVDIDDEYKECFLVQKAWAAHEADDLISLVDSVLNKEFPEQEAMKLLKLGLLCVQETSRLRPKISLALEILTNTVDMTDTVITRPGIVSDFMKIKMGRRPLEQLQESSSGEVNYSTFWSSANAGR* | 372 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte13g00543 | 371 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 168 | 180 | IPR008271 | GO:0004672|GO:0006468 | |
Pte13g00543 | 371 | Gene3D | Phosphorylase Kinase; domain 1 | 14 | 121 | - | - | |
Pte13g00543 | 371 | SMART | serkin_6 | 44 | 317 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pte13g00543 | 371 | Gene3D | Transferase(Phosphotransferase) domain 1 | 122 | 329 | - | - | |
Pte13g00543 | 371 | Pfam | Protein kinase domain | 44 | 307 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pte13g00543 | 371 | CDD | STKc_IRAK | 50 | 319 | - | - | |
Pte13g00543 | 371 | ProSitePatterns | Protein kinases ATP-binding region signature. | 50 | 72 | IPR017441 | GO:0005524 | |
Pte13g00543 | 371 | FunFam | Serine/threonine-protein kinase receptor | 14 | 121 | - | - | |
Pte13g00543 | 371 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 14 | 350 | - | - | |
Pte13g00543 | 371 | ProSiteProfiles | Protein kinase domain profile. | 44 | 298 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pte13g00543 | 371 | SUPERFAMILY | Protein kinase-like (PK-like) | 27 | 331 | IPR011009 | - | |
Pte13g00543 | 371 | FunFam | Probable LRR receptor-like serine/threonine-protein kinase At1g29720 | 122 | 321 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte13g00543 | Pte-Chr13 | 4181368 | 4183549 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte13g00543 | 28 | 336 | Receptor kinase-like Gene Family | AT1G56120 | 49.191 | 1.57e-93 | 296 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Pte13g00543 | Pkinase | 2.8e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte13g00543 | - | - | qsa:O6P43_006672 | 503.056 |