Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00541 ATGATCTTGGACTTCTCTTCTTTGATGTGTATTATTTACTGCTCTGTTATCAGTTTCACTTTCCTTTGTGATATTTACTCAATGATTCGGTGGTACATGTTTCTCATCTCAGAGAAAATGGCCAGACTGAAGCAAGCCAAAGAAGAGGCAGAAAAAGAGATTGCTGTATTTCGAGCACATATGGACTCAGAGTTCCAAGATAAAGTTGCAGAGGCCAGTGGATATTCAGGTACAAATGTTCAGCAGCTTGAAATAGAGACAGAGAAAAAGATAAATCACTTGAAGCAAGAATCGGAAAGAATATCAGAGGATGTTGTTGCCATGCTTCTCAAACATGTGACTACTGTACGAAATTAA 357 0.381 MILDFSSLMCIIYCSVISFTFLCDIYSMIRWYMFLISEKMARLKQAKEEAEKEIAVFRAHMDSEFQDKVAEASGYSGTNVQQLEIETEKKINHLKQESERISEDVVAMLLKHVTTVRN* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00541 118 Coils Coil 80 100 - -
Pte13g00541 118 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 38 118 IPR005124 GO:0016471|GO:0046961|GO:1902600
Pte13g00541 118 Pfam Vacuolar (H+)-ATPase G subunit 38 116 IPR005124 GO:0016471|GO:0046961|GO:1902600
Pte13g00541 118 Coils Coil 33 60 - -
Pte13g00541 118 Gene3D - 36 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00541 Pte-Chr13 4159781 4162624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00541 39 119 Primary Pumps ATPases(2) AT4G23710 59.259 1.64e-24 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00541 K02152 - rcu:8260112 105.916