Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00503 ATGCAAAACAATCTTCTTTCCGGTACAATTCCACTAGGTCTTGGCAAACTTAGGACGCTTCAGAGGTTAGAGTTGGCCAATAACAGTCTAACTGGTCAAATTCCAGATGATATTACTTCTACTTCACTCTCTTTCATTGATTTTTCCAGAAACAACCTATATTCTTCTCTTCCTGCTTCTATTCTTGCAATTCCCAGTTTGCAATCATTCATTGCATCGAATAATAACTTGATAGGAAAAATCCCAGATCAATTCCAGGACTGTCCCACACTTGGCATACTGGATCTCTCATCCAACAATTTGTCTGGAAGCATTCCAGCAAGTATTGCTTCATGTCAGAAGTTGGTCACTTTGAACCTAAAGAGCAACTTACTGACAAGAGAAATCCCAACAGTAATTTCAATGATGCAGACATTGGCTGGGCTTGATTTATCCAACAATTCTCTGACTGGTGGAATACCTGAAACCTTGGGTCTTGCACCAGCCTTAGAAACACTTAATGTCTCCTATAACAAGCTGGAGGGTCCAGTTCCAGCAAATGGTGTGCTGAGGTCAATAAACCCTACTGATCTTGTAGGCAATACTGCTCTTTGTGGTGGTGTCCTCCAACCATGCGGGTGGAGTTCTCCTTTCACAGCCAGCCACAGAAGCTTATGTGCAAAGCGCATCCTCACTGGATGGATATCATCACTCCTAGCAATTGGAATTGCAATATTTGGAGTTCGATCTCTATACCTAAAATGGTATACTTGTGGTGGTTGCTTCGTAGGAACATTTGGTAAGAGCAATGAAGAGTTGCCATGGAGATTAATGGCATTTCAGACGCTTGGTTTTACTAGTGCTGACATTCTAGATTCCATCAAGGAGTCAAATGTTATTGGAATGGGCGCCACTGGGGTTGTTTATAAGGCTGATATGCAAAGATCAAATTCAGTTGTTGCAGTTAAAAAGTTGTGGAGATCATCAGGAACTGACATTGAATCTGGAAGCAGTGAAGATCTTATTGGAGAAGTGAATCTTCTCGGTAGACTAAGACATAGAAACATTGTTCGGTTGCTAGGTTTGCTTCACAACAGCAGAGAAGTAATGATAATTTGTGAATATATGTCCAACGGTAATCTTGGAGATGCCTTGCATGGCAAACAAGCTGGGAGCTTGCTTGTAGATTGGGTTTCCTGGTACAATATAGCACTTGGAGTGGCACAAGGCCTTGCTTATCTTCATCATGATGACATATTGCTCGATACAGAGCTTGAGGCAAGAATAGCCGATTTTGGATTAACCAGAACCATGATCAGAAAGAATGAGACAGTTTCTATAGTGGTTGGATCCTATGGCTACATAGCCCCAGAATATGGGTACACCTTGAAAGTGGATGAGAAGATTGACATATATAGTTTTGGAGTTGTTCTATTAGAGCTTCTCACTGGTAAACGTCCATTGGATCCTGACTTTGGAGAATCAATGGACATTGTAGAATGGATTAGAAAGAAGATTAGAGATAACACACCTCTAGAAACAGTATTAGACCACACAATTGGAGACTGCAAGCATGTTCAAGAAGAGATGCTCTTAGTCCTTGGGATAGCTCTTGTTTGCACATCCAAGCTTCCCAAAGAAAGACCATCCATGAGGGATGTCATCACAATACTTGGACAGGCAAAGCCTAGAAGGAAAGTAGTAGTGATGGTCCAGGTCTAG 1701 0.4156 MQNNLLSGTIPLGLGKLRTLQRLELANNSLTGQIPDDITSTSLSFIDFSRNNLYSSLPASILAIPSLQSFIASNNNLIGKIPDQFQDCPTLGILDLSSNNLSGSIPASIASCQKLVTLNLKSNLLTREIPTVISMMQTLAGLDLSNNSLTGGIPETLGLAPALETLNVSYNKLEGPVPANGVLRSINPTDLVGNTALCGGVLQPCGWSSPFTASHRSLCAKRILTGWISSLLAIGIAIFGVRSLYLKWYTCGGCFVGTFGKSNEELPWRLMAFQTLGFTSADILDSIKESNVIGMGATGVVYKADMQRSNSVVAVKKLWRSSGTDIESGSSEDLIGEVNLLGRLRHRNIVRLLGLLHNSREVMIICEYMSNGNLGDALHGKQAGSLLVDWVSWYNIALGVAQGLAYLHHDDILLDTELEARIADFGLTRTMIRKNETVSIVVGSYGYIAPEYGYTLKVDEKIDIYSFGVVLLELLTGKRPLDPDFGESMDIVEWIRKKIRDNTPLETVLDHTIGDCKHVQEEMLLVLGIALVCTSKLPKERPSMRDVITILGQAKPRRKVVVMVQV* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00503 566 Gene3D Transferase(Phosphotransferase) domain 1 373 563 - -
Pte13g00503 566 Gene3D Ribonuclease Inhibitor 1 209 IPR032675 -
Pte13g00503 566 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 82 205 - -
Pte13g00503 566 Gene3D Phosphorylase Kinase; domain 1 286 372 - -
Pte13g00503 566 FunFam MDIS1-interacting receptor like kinase 1 373 565 - -
Pte13g00503 566 Pfam Leucine rich repeat 65 125 IPR001611 GO:0005515
Pte13g00503 566 Pfam Protein kinase domain 289 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00503 566 FunFam MDIS1-interacting receptor like kinase 1 287 372 - -
Pte13g00503 566 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 551 - -
Pte13g00503 566 SUPERFAMILY Protein kinase-like (PK-like) 283 552 IPR011009 -
Pte13g00503 566 SUPERFAMILY L domain-like 2 199 - -
Pte13g00503 566 ProSiteProfiles Protein kinase domain profile. 287 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00503 566 ProSitePatterns Protein kinases ATP-binding region signature. 293 317 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00503 Pte-Chr13 3737109 3740554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00503 1 564 Receptor kinase-like Gene Family AT1G08590 57.983 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte13g00503 Pkinase 1.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00503 - - qsa:O6P43_010449 837.025