Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00499 ATGATATTAGACGTGATATTTGATGACACCTTTTTAATTTTTATGTTCACAACGTCAAGATGCAAGCAAGCAGTCTGCTTTTCGTACTGTCAGAGGAAAATGGAGGCACGGCCAGCATTTTACATTCAAAGATCAGGTTCAAATCAGCTCACTCACATGGGGATTTCCGGGTCACTGTCTGCATCAATGCCTCTTCTTCCAACTTCCCTGGAGGAGACATACCCCAAGTTGCCTGACTCTCTACAGGTTTCAATAGAAAAAGAGCTCATGGCAACACCACTGACTCATTCTAGTGATTTGAATTCCAGTGGAGCAGTTGGTCACATATTTTCATCCTCATCTGGATATTCAACTAATCTTCATTTCTCATCTGTTTCACCCTCTGAAAAGCATTCTAGAGATACTCAATTTACCTCACAAGCATCGAGTGGATTAGCGTCTTTGCCATTTTCACATCCTTCATTCTCTGGGCAGCAAACATCTAGAACCATGAGTCGCTATGCCGACTCGTTACCCAGCTTTCATGATGTTTGTGTAAATAGTTCTTTTGAGAATATTCATGTAGAAAGAAGTAGCTGCAGCAGTGTCATGGCATCTGAGGAATATAGTAAGAAAACTGATTGGCAGGAATGGGCAGATCAGTTAATAACTGACGATGATACCTTGACTACTAGCTGGGATGACCTTCTCACTGATAATGTAGCAGATATGGAACCAAAGGTCCCAATATCATCTACTTTCCCTGCCCATCAATCCCAAGGACAACAGCCGGTCCCTGCTCCTTTGAGGGAGATTCATTCCGCTGCTACCCCTTCTTCCTCAGTAAACACAATGCTAGCCAAGCCTCGAATGCGTTGGACACCAGAACTCCATGAAGCATTTGTGGATGCTGTCAACCAACTTGGTGGTAGTGAAAGAGCTACTCCCAAGGCAGTATTGAAGCAAATGAAAGTTGAAGGCTTGACTATCTACCACGTGAAAAGCCATTTGCAGAAATATAGGACAGCCAGGTATAGACCAGACTCATTGGAAGGTACTTAA 1041 0.4323 MILDVIFDDTFLIFMFTTSRCKQAVCFSYCQRKMEARPAFYIQRSGSNQLTHMGISGSLSASMPLLPTSLEETYPKLPDSLQVSIEKELMATPLTHSSDLNSSGAVGHIFSSSSGYSTNLHFSSVSPSEKHSRDTQFTSQASSGLASLPFSHPSFSGQQTSRTMSRYADSLPSFHDVCVNSSFENIHVERSSCSSVMASEEYSKKTDWQEWADQLITDDDTLTTSWDDLLTDNVADMEPKVPISSTFPAHQSQGQQPVPAPLREIHSAATPSSSVNTMLAKPRMRWTPELHEAFVDAVNQLGGSERATPKAVLKQMKVEGLTIYHVKSHLQKYRTARYRPDSLEGT* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00499 346 Pfam Myb-like DNA-binding domain 283 334 IPR001005 -
Pte13g00499 346 SUPERFAMILY Homeodomain-like 279 335 IPR009057 -
Pte13g00499 346 NCBIfam myb-like DNA-binding domain, SHAQKYF class 281 335 IPR006447 GO:0003677
Pte13g00499 346 Gene3D - 280 339 - -
Pte13g00499 346 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 260 341 IPR044848 GO:0003700
Pte13g00499 346 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 285 338 IPR017930 -
Pte13g00499 346 FunFam Myb family transcription factor 280 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00499 Pte-Chr13 3713243 3715905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00499 34 341 G2-like Transcription Factor Family AT4G28610 43.750 6.23e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte13g00499 Myb_DNA-binding 1.6e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00499 - - cave:132165545 373.244