Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00498 ATGTTTGATAAAACTCTGCACTGTCTGATTCTCTTCAGCGTGCTTGTCGAGATTTCAGCACAGGAAGAAGCAGAAGCTCTGGTAAACTGGAAAAACAGTTTGCATTCTTCGGTGTTTCTCTCATCATGGACCCTTACCAATAGCAATGGCGGCACCCCATGCAACTGGACCGGTATTAGGTGCAATCAAGTTGGCAGTGTCAGTGAAATAAACCTTTTTAATTCAGGCGTGGATGGGACACTTCGCAGGTTTGATTTCTCAGCCTTTCCTAGTCTCAATTCTCTAAACCTCAGTATGAATAATCTGGTGGGAGATTTACCTGCTGGAATTGGAAATGGAACTAGGCTCACCATGCTTGATCTTAGTAGCAATAATATTACCTACCCAATCCCAGCAGAAATTGGCAAACTCTTGCAACTCCAAGTGCTTATTCTGTATAACAATTCTTTCACTGGTCAAATACCATATCAGCTCAGTAATTTGCAGAAACTTAGGATTCTTGACCTTGGAGCAAATTACTTGAACGATCCCGAACCACTTATGTTCAAGGGGATGGAATCCATAACAGAACTTGGACTCCACTATAACAATTTGGTAGAGGTACCCCAGTTCATATTAGAATGTCCCAAGTTGATGTTTCTTAATCTGTCTGATAATACCATCAGTGGTCAGATTCCTGTGAGTTTACTGACCAAGCTTCAGAACCTTACGTTTTTAGATATGACTTCTAATTCTCTGGAAGGGCAGATTCCAACAGATGTAAAAAATCTTTTAAAACTGAAGGTGCTGAGGCTTGGAATGAACAAGCTTAATGGTAGTGTACCAGAAGAGATAGGAATGCTATCAAGCCTTGAGGTGCTTGAGTTGCATCAAAATGACTTTGAAGGGCCTATACCATCTTCAATAGGAAACCTGAGGAATCTTCAAAAGTTGCACCTCGAAAATGCAGGGCTTAATTCCAGCATCCCAGAGGAACTAGGCTTATGTACCAACCTTACTTTCCTTGATTTATCAGGAAACGACTTTAAAGGTGCTTTGCCTCTTTCAATGTCCTCACTCAAAAGGATCACCGAGTTGGGAATGTCAAATAACCAATTATCTGGAGAAATTCACCCATTTCTGTTGTCTAATTGGACAGAACTCATTTCTTTGCAACTTCAAGAGAATCAATTTTCGGGTGTAATTCCTTCTGATATTGGATTACTTCGTCGGCTCAAATTTCTATACCTATTCCAAAACCACTTTTCAAGTCAAATACCTTTAGATATTGGTAACTTGTCAAGCGTAGTGGAACTCGACTTATCTAGCAACTTCTTCAATGGTTCCATCCCATCAACCATCAGACATTTACTCAGGCTCACCAAGTTTCGTCTGGCTGGCAACCAACTCACCGGTCCAATACCTCCGGAAATAGGTCAATTGGAAAGCTTAGAAGAACTAGACTTATCCTCCAACAAACTTCAAGGAAACTTGCCCTCATCTATCAACCAATTGAAAAGCATCTCCATCCTATATCTCTCATTTAATAACCTCTGGGGAAGCATTCCTGAAGAATTTGGCCCTGACTTTCTGAAAAATGTGAGCTTTGCTAGCAACAATTTTACTGGAAAACTTCCTCCAGGGATATGCAGAGGAGGGAAACTCATCTATCTAGCTGCTAATGAAAATAAACTAGTGGGACCAATTCCTGAAACTCTTAAAAACTGTACAGGCTTGAACAGAATCAGGCTTGATAAGAACCTTATCGATGTAGATATCTCCGACTCATTTGGTATATACCCTAGCCTCGAGTTCATTAATTTAGGAGATAATCAGCTTTCTGGTGTACTGTCGCATAACTGGGAGCAGTGCCAAAGTCTAAGTACTTTTAGCATTTATGGTAATAAGATATCAGGGAGTATACCACCGGAGTTTGGAAAGTTGCCAAATTTGCAAAGTCTTGACCTTTCTCAGAACAACCTTACAGGGAAGATACCGCCCGAGCTTTTCAGATCAGCTTCAATCCTACTGAAATTAAATTTGAGCAACAATCAGCTCTCAAATAAGATACCCTCTCAGATCGGGTATCTTGCGAAGTTGCAGTATCTGGATTTCTCAGCGAATAATCTAAGTGGTAACATACCAAAAGAACTAGGCAACTGCGAGGAACTTGTATTCTTGAAACTTTGTAAGAACAATTTAAATGGCACTATGCCATCGGAGCTTGGAAATTTGGTGGCATTGCAACCTCTCCTAGATATCAGCCATAATTCACTTACAGGAGAAATAAACCCGCAGCTTCAAAAGTTGACCAGTCTAGAAGTGTTGAACCTCTCCCATAATCATCTTTCTGGCGAAATACCTCCAGTTCTTAAAGGGCTTGTGAGTCTTCAGATTGCCGATGTGTCCTATAACAAATTATATGGTCCCCTCCCTGACAATGCAGCCTTTCAAAATGCCACTTCCGTTGAACTGGAGGGTAATGCTGGTTTATGCGGTCAAGTTGCAAAAGGTCTTAAGGCTTGTACTAGTCAGACTTCATTTGAAAAACGTAGCAAAAGAAATCGATGGAGGCTGATAGTTGCCATAGTTGTTCCGCTGGCTGCTTCCGTGATTCTGCTTTTTGGTTTTGGGATTTTCATGTACCGCCGACAGCATAGAATTGATCTCCTTAAAATTGGCAACAGTGCTAGAAAAGAAAATTCATTCTTTCTATGGAATTACAGGAAAGAAGTAGATTTCCGAGATATGATCAATGCTACGGAGAACTTCGATGACAAGAACTGTATAGGCAGAGGTGGACAAGGCAGTGTATACAAGGCAATACTTCCATCAGGCGATGTCTTTGCGGTGAAGCATCTTCATCAATCACAGGAAACACAATTCCCTGAAAATCAAATAAAGAACTTCATGTCTGAAATCCATGCACTGACAAATATTCGGCATCGAAATATTGTGAAATTGTGCGGGTTCAATTACTCCGACCGATCCATGTGTTTTATCTACGAGTATGTAGACAAGGGTAGTCTGCAAAAATTGTTGCAGAACGAAGAGGAGGCGAAACGTATAAACTGGGAGATCAGATTAAGCATTACCAGGGGAATAGCACAAGGTTTGTCATACTTGCACCATGACTGTAGCCCGGCAATTGTGCATCGAGACATGTCAGCGAACAATATCTTGTTGAGCTCAGATTTTGTGCCCAAGATATCTGACTTTGGCACAGCAAGGTTGCTTCAAGATGGGTCCATTTGGACAGACCCTGTTGGCTCCTATGGCTATATGGCCCCAGAGCTCGCTTTCACTATGAAAGTGACAGAAAAATGTGATGTGTACAGTTTTGGGGTCGTAACGTTAGAAGTGATTGTTGGCGGACACCCACAGGAGCTTCTGTCCATGATGCAGTCTGGAGGACATGATCTAAACCTTGTAGATATCTTCGACAAGAGGATTGATCCTCCAACTGGTCCCATCGTCCCACAGTTGATCAAGGCTGCAAGCCTCGCTCTAAAATGCATCAACGAGAATCCGTTGTCTCGACCAAGCATGCAGCAGGTGTCAACTGACCTGTCAGCAGGCTCATCTATGTCTCTCTCTTCACCTATTGAGATGATCAAGATGCAGGATTTACTGCAAAATTAG 3621 0.4176 MFDKTLHCLILFSVLVEISAQEEAEALVNWKNSLHSSVFLSSWTLTNSNGGTPCNWTGIRCNQVGSVSEINLFNSGVDGTLRRFDFSAFPSLNSLNLSMNNLVGDLPAGIGNGTRLTMLDLSSNNITYPIPAEIGKLLQLQVLILYNNSFTGQIPYQLSNLQKLRILDLGANYLNDPEPLMFKGMESITELGLHYNNLVEVPQFILECPKLMFLNLSDNTISGQIPVSLLTKLQNLTFLDMTSNSLEGQIPTDVKNLLKLKVLRLGMNKLNGSVPEEIGMLSSLEVLELHQNDFEGPIPSSIGNLRNLQKLHLENAGLNSSIPEELGLCTNLTFLDLSGNDFKGALPLSMSSLKRITELGMSNNQLSGEIHPFLLSNWTELISLQLQENQFSGVIPSDIGLLRRLKFLYLFQNHFSSQIPLDIGNLSSVVELDLSSNFFNGSIPSTIRHLLRLTKFRLAGNQLTGPIPPEIGQLESLEELDLSSNKLQGNLPSSINQLKSISILYLSFNNLWGSIPEEFGPDFLKNVSFASNNFTGKLPPGICRGGKLIYLAANENKLVGPIPETLKNCTGLNRIRLDKNLIDVDISDSFGIYPSLEFINLGDNQLSGVLSHNWEQCQSLSTFSIYGNKISGSIPPEFGKLPNLQSLDLSQNNLTGKIPPELFRSASILLKLNLSNNQLSNKIPSQIGYLAKLQYLDFSANNLSGNIPKELGNCEELVFLKLCKNNLNGTMPSELGNLVALQPLLDISHNSLTGEINPQLQKLTSLEVLNLSHNHLSGEIPPVLKGLVSLQIADVSYNKLYGPLPDNAAFQNATSVELEGNAGLCGQVAKGLKACTSQTSFEKRSKRNRWRLIVAIVVPLAASVILLFGFGIFMYRRQHRIDLLKIGNSARKENSFFLWNYRKEVDFRDMINATENFDDKNCIGRGGQGSVYKAILPSGDVFAVKHLHQSQETQFPENQIKNFMSEIHALTNIRHRNIVKLCGFNYSDRSMCFIYEYVDKGSLQKLLQNEEEAKRINWEIRLSITRGIAQGLSYLHHDCSPAIVHRDMSANNILLSSDFVPKISDFGTARLLQDGSIWTDPVGSYGYMAPELAFTMKVTEKCDVYSFGVVTLEVIVGGHPQELLSMMQSGGHDLNLVDIFDKRIDPPTGPIVPQLIKAASLALKCINENPLSRPSMQQVSTDLSAGSSMSLSSPIEMIKMQDLLQN* 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00498 1206 SUPERFAMILY RNI-like 69 392 - -
Pte13g00498 1206 SUPERFAMILY Protein kinase-like (PK-like) 895 1182 IPR011009 -
Pte13g00498 1206 FunFam Inactive leucine-rich repeat receptor-like protein kinase 282 521 - -
Pte13g00498 1206 SUPERFAMILY L domain-like 616 826 - -
Pte13g00498 1206 Pfam Leucine Rich Repeat 765 787 IPR001611 GO:0005515
Pte13g00498 1206 FunFam Os07g0541700 protein 998 1079 - -
Pte13g00498 1206 FunFam Leucine-rich repeat receptor protein kinase MSP1 882 997 - -
Pte13g00498 1206 Gene3D Ribonuclease Inhibitor 523 843 IPR032675 -
Pte13g00498 1206 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 522 839 - -
Pte13g00498 1206 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 524 1184 - -
Pte13g00498 1206 ProSiteProfiles Leucine-rich repeat profile. 765 787 IPR001611 GO:0005515
Pte13g00498 1206 Gene3D Ribonuclease Inhibitor 454 522 IPR032675 -
Pte13g00498 1206 Pfam Leucine rich repeat 139 198 IPR001611 GO:0005515
Pte13g00498 1206 Pfam Leucine rich repeat 642 703 IPR001611 GO:0005515
Pte13g00498 1206 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 180 274 - -
Pte13g00498 1206 Pfam Leucine Rich repeat 329 342 IPR001611 GO:0005515
Pte13g00498 1206 Pfam Protein kinase domain 919 1179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00498 1206 ProSiteProfiles Leucine-rich repeat profile. 643 665 IPR001611 GO:0005515
Pte13g00498 1206 Gene3D Ribonuclease Inhibitor 19 181 IPR032675 -
Pte13g00498 1206 Gene3D Ribonuclease Inhibitor 182 276 IPR032675 -
Pte13g00498 1206 Gene3D Ribonuclease Inhibitor 277 370 IPR032675 -
Pte13g00498 1206 ProSiteProfiles Leucine-rich repeat profile. 476 498 IPR001611 GO:0005515
Pte13g00498 1206 PRINTS Leucine-rich repeat signature 763 776 - -
Pte13g00498 1206 PRINTS Leucine-rich repeat signature 644 657 - -
Pte13g00498 1206 SMART LRR_typ_2 257 281 IPR003591 -
Pte13g00498 1206 SMART LRR_typ_2 641 665 IPR003591 -
Pte13g00498 1206 SMART LRR_typ_2 690 714 IPR003591 -
Pte13g00498 1206 SMART LRR_typ_2 763 786 IPR003591 -
Pte13g00498 1206 SMART LRR_typ_2 161 184 IPR003591 -
Pte13g00498 1206 SMART LRR_typ_2 474 498 IPR003591 -
Pte13g00498 1206 SMART LRR_typ_2 353 377 IPR003591 -
Pte13g00498 1206 SMART LRR_typ_2 185 208 IPR003591 -
Pte13g00498 1206 SMART LRR_typ_2 402 426 IPR003591 -
Pte13g00498 1206 SMART LRR_typ_2 89 113 IPR003591 -
Pte13g00498 1206 SMART LRR_typ_2 305 329 IPR003591 -
Pte13g00498 1206 ProSiteProfiles Protein kinase domain profile. 917 1191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00498 1206 Gene3D Ribonuclease Inhibitor 371 453 IPR032675 -
Pte13g00498 1206 Gene3D Transferase(Phosphotransferase) domain 1 998 1195 - -
Pte13g00498 1206 SUPERFAMILY RNI-like 362 680 - -
Pte13g00498 1206 FunFam Nuclear pore complex protein NUP107 20 179 - -
Pte13g00498 1206 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1043 1055 IPR008266 GO:0004672|GO:0006468
Pte13g00498 1206 Gene3D Phosphorylase Kinase; domain 1 882 997 - -
Pte13g00498 1206 Pfam Leucine rich repeat N-terminal domain 21 62 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00498 Pte-Chr13 3698897 3705498 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00498 4 666 Receptor kinase-like Gene Family AT4G08850 32.792 3.25e-89 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte13g00498 Pkinase 2.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00498 - - qsa:O6P43_006862 1544.64