Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00482 ATGGATTCGGCAAAGAGTTGGTTTCAGAAGTTTCAGCCAAGGGATAAAATGAGATCATACAATAGGAGAAAGGATAGCAACGAGGATGATCCTAATTCACAAGTCGATGATGAAGAGCTTTCAAATACCACCAAGCAGAAAGTTTCAGCAGCCAAGCAGTATATTGAGAACCATTACAAGGAGCAAATGAAGAATCTTCAGGAAAGAAGGGAACGTCGGATCATTTTGGAAAAGAAGTTAGCTGACGCAGATGTCTCTGAAGAAGATCAAAACAACCTTCTCAAATTTTTGGAGAAAAAAGAAACTGAATACATGCGACTACAAAGGCATAAGATGGGTGTTGATGATTTTGAGTTACTGACTATGATAGGCAAAGGTGCATTTGGAGAGGTTAGGGTCTGCAGAGAAAAGACAACAGGCCATGTATATGCAATGAAAAAGCTCAGAAAATCAGAGATGCTCCGTAGAGGCCAGGTAGAACATGTGAAAGCTGAACGGAATTTATTGGCTGAAGTTGATAGTAACTGCATCGTTAAACTCTACTGTTCTTTCCAAGATAACGAATACCTTTATCTTATTATGGAGTATCTACCTGGTGGAGATATGATGACTTTGCTTATGAGAAAGGATACCTTAAATGAAGATGAAGCCAGATTTTATGTAGGAGAGACAGTTCTGGCAATCGAATCTATCCACAAACACAATTACATCCATAGGGATATAAAGCCAGATAATTTGTTACTCGACAGATATGGACACTTGAGACTTTCAGATTTTGGTTTGTGTAAACCATTAGATTGCAGTAAACTTGATGATCAGGACCTTTCTGTTGGCCAAAATACTAATGGATCCACACAAAATAATGACCGGTCTGTAACTCCCAAGCGTTCTCAACAAGAACAACTACAACATTGGCAAAAGAATCGAAGGACGCTTGCTTATTCCACTGTTGGCACACCAGACTATATTGCTCCAGAAGTTCTCTTAAAGAAAGGCTATGGAATGGAATGTGATTGGTGGTCACTTGGTGCAATTATGTTTGAAATGCTGGTGGGTTATCCACCATTTTATTCCGATGATCCAATGTCAACATGTCGAAAGATAGTAAACTGGAGGACGCATCTGAAATTCCCTGAAGAAGCAAGGATATCTCCTGAGGCTAAGGATCTTATTTGTAAACTCTTGTGCAATGTTGATCATAGGTTGGGATCAAAGGGCGCTGATGAAATAAAGGCTCATCCTTGGTTCAGAGGTGTTGAATGGGATAAATTATATCATATGGAAGCTGCATTTATCCCTGAGGTCAATGATGAATTAGATACACAAAACTTTGAGAAGTTTGATAACGAGCCTGACCATCTGACTCATAGTACATCCAAATCTGGGCCATGGAGGAAGGTGAGCTCGCTGTATAGTTTTTTTTGTTAA 1428 0.3943 MDSAKSWFQKFQPRDKMRSYNRRKDSNEDDPNSQVDDEELSNTTKQKVSAAKQYIENHYKEQMKNLQERRERRIILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLRKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDNEYLYLIMEYLPGGDMMTLLMRKDTLNEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHLRLSDFGLCKPLDCSKLDDQDLSVGQNTNGSTQNNDRSVTPKRSQQEQLQHWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMFEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEARISPEAKDLICKLLCNVDHRLGSKGADEIKAHPWFRGVEWDKLYHMEAAFIPEVNDELDTQNFEKFDNEPDHLTHSTSKSGPWRKVSSLYSFFC* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00482 475 ProSiteProfiles AGC-kinase C-terminal domain profile. 417 475 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pte13g00482 475 CDD MobB_NDR_LATS-like 51 112 - -
Pte13g00482 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Pte13g00482 475 MobiDBLite consensus disorder prediction 9 30 - -
Pte13g00482 475 Gene3D Transferase(Phosphotransferase) domain 1 203 433 - -
Pte13g00482 475 ProSiteProfiles Protein kinase domain profile. 117 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00482 475 FunFam Non-specific serine/threonine protein kinase 315 434 - -
Pte13g00482 475 SMART serkin_6 117 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00482 475 MobiDBLite consensus disorder prediction 1 49 - -
Pte13g00482 475 FunFam Non-specific serine/threonine protein kinase 201 268 - -
Pte13g00482 475 Gene3D Phosphorylase Kinase; domain 1 107 202 - -
Pte13g00482 475 ProSitePatterns Protein kinases ATP-binding region signature. 123 146 IPR017441 GO:0005524
Pte13g00482 475 SMART pkinase_C_6 417 475 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pte13g00482 475 SUPERFAMILY Protein kinase-like (PK-like) 90 462 IPR011009 -
Pte13g00482 475 PANTHER SERINE/THREONINE-PROTEIN KINASE 25 449 - -
Pte13g00482 475 CDD STKc_NDR_like 115 469 - -
Pte13g00482 475 FunFam Non-specific serine/threonine protein kinase 88 200 - -
Pte13g00482 475 MobiDBLite consensus disorder prediction 278 303 - -
Pte13g00482 475 Pfam Protein kinase domain 118 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00482 Pte-Chr13 3584870 3589916 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00482 1 469 AGC Kinase Gene Family AT1G03920 76.483 0.0 773
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Pte13g00482 Pkinase 9.7e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00482 K08790 - qsa:O6P43_006882 825.083