Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00465 ATGGTGAGAGCTCCCTGCTGTGAGAAGATGGGATTGAAGAAAGGACCATGGACCGCGGAAGAAGATCGTATACTCGTCAATTTTATCACAGCCTACGGCCATGCCAATTGGCGAGCTCTGCCCAAAAAAGCAGGCTTGTTGAGATGTGGGAAGAGTTGCAGGCTGCGATGGACAAACTATTTGAGGCCTGACATTAAGCGGGCTAGATTACCAGGACGAACTGACAATGAGATTAAGAATGTTTGGCACACGCACTTGAAGAAAAGACTCAAACAAATGCATCGTGATGAAGCCACCGACACAAGAAGAAACCCCGTAGAAACTTCCAATTTGAACATGGACCTTAAAGGAGAAAAAGACCCCACTTTTACTACTAGTAATACGATCAATACAGAATGCCAGGAAGCGAGACAAGCAGTATGCTCTCCTCTACATTCTGCATATGAAGACATCATGTCGTCCAGCATTACCATGACTACTGACGATTACGTTAACATTGAAAATAAAAATAGTAGCAGCATCAGTACTTGTTGTACCAGTTCCATGCATATCACAAGTGAACTTCCTGAGGTAGATGAGTCTTTCTGGACAGAAGTATTAAAGTTAGTAGACACTGCTGATCAAATCAGCTTTGATGTGGTCAATGATTCTTCGGCTATGGATAATATTGATGATGCGCTGCAATGGCGATATCCATGCATGCAACCCATCGATGTCCAAGTTACACCTGAATACGCGAATGATAACATGGATTTCTGGTTAGATATTTTTACAAGAGCAGAGGAGCTCACAAACACTGGAATCAATCTGAGCAAGATGGACGAACACAGGTGA 834 0.4317 MVRAPCCEKMGLKKGPWTAEEDRILVNFITAYGHANWRALPKKAGLLRCGKSCRLRWTNYLRPDIKRARLPGRTDNEIKNVWHTHLKKRLKQMHRDEATDTRRNPVETSNLNMDLKGEKDPTFTTSNTINTECQEARQAVCSPLHSAYEDIMSSSITMTTDDYVNIENKNSSSISTCCTSSMHITSELPEVDESFWTEVLKLVDTADQISFDVVNDSSAMDNIDDALQWRYPCMQPIDVQVTPEYANDNMDFWLDIFTRAEELTNTGINLSKMDEHR* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00465 277 Gene3D - 13 66 - -
Pte13g00465 277 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pte13g00465 277 CDD SANT 16 61 IPR001005 -
Pte13g00465 277 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 68 202 - -
Pte13g00465 277 FunFam MYB-related transcription factor 13 66 - -
Pte13g00465 277 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pte13g00465 277 Gene3D - 67 112 - -
Pte13g00465 277 MobiDBLite consensus disorder prediction 90 121 - -
Pte13g00465 277 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Pte13g00465 277 SUPERFAMILY Homeodomain-like 14 87 IPR009057 -
Pte13g00465 277 SMART sant 13 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00465 Pte-Chr13 3436392 3437581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00465 1 265 MYB Transcription Factor Family AT2G31180 39.456 2.21e-54 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte13g00465 Myb_DNA-binding 2.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00465 K09422 - zju:107425754 231.106