Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00459 ATGAGCTATTCAGAGAGCACTTCTTCTATACCCTTCAGATCTAAGAAGCCCAATGTTGAACCAAAGAAAAAGGCAAAGGCCCTACTGCAGAAAGCCAACGAATGCATCACTACAACGCCGGAGAAGACTTCACAGCTTCCTAACCGAGCGCGAAATCGTGGTGTTGCGTTGTCTCTCAAAGAAGTCAGAAAGGTAGCTGAGGCACTTCAGCAGTCCAAAAAGGGTAACCAAGAAAACGAGGGTCGTGAACGATCCAAATCTGCTAGAAGACAGATCAATATGTCGCCAACAAAACCCAAGAAGGAGGTTGATGGATCAACCAAGCTTCCGCCAAAGTATGAATTGTTGGGTGAGTTTTTTGATGGTTTGGATAGTTCGATCCGTTTGTTACGGTTGAAGGGATCGGTGCCATCTTTCACCAAGATATGCGCCCAGATTGAATGCTTGACTGAAAGGAGGTTTACACATGGCCATTTGGCTCAATTAAAATTTATCTTACCTGAGGGAATTGAGGTAAAGAAGGTGCTCACCTTTGAAGAAAGAACAAGTTGTATGAAACCAGATCTCCATATTGCTATGAGTGCTGATGGAATAAAATCTCATGGAAATTTGGCATCTGAAGGAGGGCCTATGTCACTAAGGAAGTTATTTCGTGCACGGCTTACAGATTTTCTGAAATCGCATCCTGAGATTGATGAAATTCCTGAGCATCCGCTGCCAGCTCCATTCAATCATTCCAGGAATGATCATCATTTAGAGATGGTGAAAGCTAATGCTTCAGACTCACATGTAAAACAGCCATTGGATGCATCATCTAAAGCAATTAGGGGACAATACGCAGCAGCCTCTCATATATCTCAGTCTTTCAGCAGACGATTTTCACAAAAACACTTTGCCAAAAAAGTGGATAACGTGCCTGATAATGTAATGGAGGATTTTGCCCGGCATCCTGACTTCTCAGTTGCAGACCCATTTGTCCTAAAAGACGTCTCCAATGGGGAATCTGGATCTTCATTCTCACCTAGTGGTGAAAAAATATACTCTTGCTCTAAGGATGGTGCTGGACCAACTGATGTCCAACTTGATACACCTTTGAAAACCCTTCATTCAAATGAGACTACTGATGGTTTGTTTAGTAATATGGCTTATAGTGAATCAACTCCTGCCAAAGTTGGTTCCACTCCATCTAGACTAATGTCTGCGACACCTGGCTTGTTTCCACCTAAGAGATCTTTTATGAGTCCTGACAGTGACTCCTCTAGCTCACCTAATAAACTGGTCAGGCGACCGCCACGTTGTAGGTCGCTGAAATTTGACACTCCTGTGAAGAATATGGAAGATAATATTGAAGATAACAATACTAATGGGCCATCCTTAAGTGATGATATTCGTGATATTCTTCCAGAAGATCTTCTGCAATCGATTAGGGAAAAGGAGAGAATAGCTATGGAGGAGCGAAATCCAGCTATTTCACAAGCAAAGCGGCGGCAGAAAATGATTGCATGCCTGCCTAAGCTCTTCAACATGATTCACTTGCTGTTCCATGGACTCAATCGAACTGTTTTGACAAAGGAGGAGCTAGTACACAAGATAATCTCAGGCCATTGTGATATAATTGATACAAGAGAGGTTGAAGAGCAGCTTAATTTGTTGTTGGAACTGGTTCCAGAATGGATTTGTGAAAAGCGTGCATCTACTGGGACTTTACTACTTTGCATTAATAAAATATCAAATGCCGAATCTATCCGTGCTCTACTTCAAGAAGCCAAGTGA 1773 0.4241 MSYSESTSSIPFRSKKPNVEPKKKAKALLQKANECITTTPEKTSQLPNRARNRGVALSLKEVRKVAEALQQSKKGNQENEGRERSKSARRQINMSPTKPKKEVDGSTKLPPKYELLGEFFDGLDSSIRLLRLKGSVPSFTKICAQIECLTERRFTHGHLAQLKFILPEGIEVKKVLTFEERTSCMKPDLHIAMSADGIKSHGNLASEGGPMSLRKLFRARLTDFLKSHPEIDEIPEHPLPAPFNHSRNDHHLEMVKANASDSHVKQPLDASSKAIRGQYAAASHISQSFSRRFSQKHFAKKVDNVPDNVMEDFARHPDFSVADPFVLKDVSNGESGSSFSPSGEKIYSCSKDGAGPTDVQLDTPLKTLHSNETTDGLFSNMAYSESTPAKVGSTPSRLMSATPGLFPPKRSFMSPDSDSSSSPNKLVRRPPRCRSLKFDTPVKNMEDNIEDNNTNGPSLSDDIRDILPEDLLQSIREKERIAMEERNPAISQAKRRQKMIACLPKLFNMIHLLFHGLNRTVLTKEELVHKIISGHCDIIDTREVEEQLNLLLELVPEWICEKRASTGTLLLCINKISNAESIRALLQEAK* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00459 590 FunFam CDT1-like protein a chloroplastic 460 590 - -
Pte13g00459 590 CDD Cdt1_c 466 587 IPR032054 -
Pte13g00459 590 CDD Cdt1_m 103 250 IPR014939 -
Pte13g00459 590 SMART CDT1_2 109 241 IPR014939 -
Pte13g00459 590 MobiDBLite consensus disorder prediction 76 108 - -
Pte13g00459 590 Pfam DNA replication factor CDT1 like 109 175 IPR014939 -
Pte13g00459 590 MobiDBLite consensus disorder prediction 405 429 - -
Pte13g00459 590 MobiDBLite consensus disorder prediction 1 108 - -
Pte13g00459 590 Pfam DNA replication factor Cdt1 C-terminal domain 471 561 IPR032054 -
Pte13g00459 590 PANTHER DNA REPLICATION FACTOR CDT1 19 590 IPR045173 GO:0003677|GO:0030174|GO:0071163
Pte13g00459 590 SUPERFAMILY "Winged helix" DNA-binding domain 105 243 IPR036390 -
Pte13g00459 590 Coils Coil 59 79 - -
Pte13g00459 590 Gene3D - 461 590 IPR038090 -
Pte13g00459 590 MobiDBLite consensus disorder prediction 32 51 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00459 1 588 Core DNA Replication Machinery Family AT2G31270 38.625 9.52e-112 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00459 K10727 - qsa:O6P43_006919 587.03