Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00453 ATGCATACTTCACTAGCTATGGAATCTAATAACAGTCAAGAACAGTACTCGTCTAAGAGCTCAAGCGAACAAACTGCTGATCGATCAGATTCTGAGCAGACTGACGACCATGTCAACTGTATGGTCAGTGGTGGCAGATTCTATGAGTGTGTCTTCTGTAAGAGAGGCTTCACCACCGCTCAAGCTTTAGGTGGACACATGAATATACATAGGAAAGATAGAGCCAAGACCAAACGAAGCTCAGTCGTGCCTTCAAGTTCAAGTAAGCCCGATGATGAGGATTACGTCAAGTTTAGGTCTTATCCATCCATTCCAAGCAATTTTCAACCCCAATATTATGTAGCTGCACCAGATCAGGTACCTACATATTATCAAGATTACTTTGCCCCATCAACCATTTTTGGTTTCAAAAGACCTTCATACGCACAGTACAGTCAAAACCAAATGACTTTCAATCTGTTTGGTGAAGACTGGAAGAGAAACTTCGGCTGTATAGATGACGATAAAGGAAAGATTGAGGCCGGCAGTGAAGATAATGACCTTGATTTGGAGCTTCGTCTGGGTCATTACCCGTAG 576 0.4271 MHTSLAMESNNSQEQYSSKSSSEQTADRSDSEQTDDHVNCMVSGGRFYECVFCKRGFTTAQALGGHMNIHRKDRAKTKRSSVVPSSSSKPDDEDYVKFRSYPSIPSNFQPQYYVAAPDQVPTYYQDYFAPSTIFGFKRPSYAQYSQNQMTFNLFGEDWKRNFGCIDDDKGKIEAGSEDNDLDLELRLGHYP* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00453 191 MobiDBLite consensus disorder prediction 1 37 - -
Pte13g00453 191 ProSiteProfiles Zinc finger C2H2 type domain profile. 48 75 IPR013087 -
Pte13g00453 191 Gene3D Classic Zinc Finger 37 101 - -
Pte13g00453 191 Pfam C2H2-type zinc finger 48 72 - -
Pte13g00453 191 MobiDBLite consensus disorder prediction 69 93 - -
Pte13g00453 191 ProSitePatterns Zinc finger C2H2 type domain signature. 50 70 IPR013087 -
Pte13g00453 191 SUPERFAMILY beta-beta-alpha zinc fingers 44 75 IPR036236 -
Pte13g00453 191 PANTHER OS07G0101800 PROTEIN 7 189 - -
Pte13g00453 191 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00453 Pte-Chr13 3337646 3338406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00453 46 191 C2H2 Transcription Factor Family AT4G17810 32.432 2.77e-17 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte13g00453 zf-C2H2_6 2.2e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00453 - - rcu:8274766 140.969