Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00452 ATGGGCGCCGCAGACAACAATATCGTTGTTGGTTCTCATGTCTGGGTCGAAGATGCATCGTTAGTTTGGGTTGATGGACAAGTAGTGCAAATTAATGGAGATAAAGCAGAGATCCAAACTAGTAATGAGCAGAAGGTGGTCGCGAAGCTATCTAAATTGTATCCCAAGGATACAGATTCTCCTGAGGGTGGAGTCGATGACATGACCAAACTGGCATATTTACACGAGCCTGGGGTGCTTCATAATTTAGCTACTCGATATCAAATGAATGAAATATACACTTACACTGGAAACATTCTTATTGCCATCAATCCATTTCAACGTCTCCAACATTTGTATGATATCGACACAATGAAATGTTACAAAGGATTACCATTGGGACAATTGAGTCCTCATGTTTTCGCAATTGCTGATGCTGCATACAGGGCAATGATTAATGAAGGAAAAAGCAATTCAATTCTTGTTAGTGGAGAGAGTGGAGCTGGTAAGACAGAAACCACAAAAATGCTTATGCGTTATCTAGCATTTGTAGGAGGACATAGAGGAGGTGAAGGCAGAACAGTTGAACAACAAGTTCTAGAATCGAACCCAGTTCTTGAAGCATTTGGAAATGCAAAAACTGTTAGAAATAACAACTCCAGTCGTTTTGGGAAATTTGTTGAGATTCAATTTGACAAGGCTGGAAGAATATCCGGGGCAGCAATTAGAACTTATCTCCTTGAAAAGTCTCGCGTTTGCCAAATATCTGATACGGAACGCAATTATCACTGTTTCTACCTTCTTTGTGCTGCACCATCTGAGGAAAGGGAGAGATATAAATTGGGCGATCCTAAGTCATTTCATTACCTTAATCAGTCTAATTGTTACAAATTGGATGGTGTTGATGATGCCAAAGAGTATATTACCACGAAAAGAGCAATGGAGATTGTAGGAATCAATCAACATGAACAGGATTCGATCTTTAGAGTTGTGGCTGCAATACTTCATCTTGGAAATATCAGGTTTACGAAGGGTGATGAAAGCGATTCATCAGTTCTAGAAGATGATCAGTCCAAGTTCCATCTTAAAGTGACAGCAGAACTTCTCATGTGTGATCCTGGTAAATTGGAAGATGCACTCTGTAAACGTTTAATGGTTACACCTGAAGAAGTTATCAAGAGATCTCTTGATCCTCTTGCTGCAGCAACAAGTAGAGATGGTTTAGCCAAGATTATATACTCCCGTCTGTTTGACTGGTTAGTGAATAAAGTCAATATCTCCATTGGGCAAGACAAATCATCAAACTACCTGATCGGGGTCCTTGACATATATGGTTTTGAAAGCTTTATAACCAATAGCTTTGAGCAGTTTTGCATTAATTTTACAAATGAAAAGCTGCAGCAACATTTCAACCAGCATGTGTTCAAATTTGAGCAAGAGGAATACACCAAGGAGGGCATTGACTGGAGCTACTTAGAATTTGTAGATAATCAGGATGTATTGGATCTTATTGAAAAGAAGCCAGGTGGAATCATCTCTCTTCTCGATGAAGCTTGTATGTTTCCGAAGTCGACTCCGGAAACCTTCACTGAGAAGCTTTATCAGACATTCAGTAATCACAAACGCTTTATTAGGCCAAAATTGGCTCGGTCAGAGTTTACTATTGTTCATTATGCTGGAGATGTAAAATATCAGTCCGATCAGTTTTTAGACAAAAACAAAGACTATATTGTTGTTGAGCATCAAGATTTGCTTAGTTCATCCACCTGTTCTTTTGTAGCAGGCCTTTTCCCTCCAGTTACCGAGGAGTCATCCAAACCTTCAAAGTTTTCATCTATTGGTTCTCGTTTTAAGCTTCAATTACAACAATTAATGGAGACTCTCCATTCTACGGAGCCACACTATATTAGGTGTGTGAAGCCAAATAGTCTCTTAAAACCTGCCGTGCTGGAGAATATGAACATCATACAACAATTACGCTCCGGCGGAGTTCTTGAAGCAGTGAGAATAAAATGTGCTGGATTCCCTACTCACAGGGCCTTCCCTGAATTTTTAAGTCGATTCCATCTCCTTGCCCCTGATGTTTTAAGTGAGAACTTTGATGAAAAGGATGCATGCAAGATGATTCTTGAGAAGATTGGTCTCGCTGGTTATCAGATAGGGAAAACACAAGTATTTCTGAGAGCTGGACAGATGGCTGAACTAGATGCTCTAAGAACTAGTTTATTTAACAACTCTGCTGTAGTTATTCAGAGCCGGAGCAGAACTTATATTGCGCAGAAGAAATATCTTAGACTCAAAGAGGCTTGTATTTGTATACAATTAATATGCAGAGGTCAGCTGGCTCGTAAGTTTTATGAGATTAAGAAGAAGGAGGCAGCTTCTATACGAATCCAGAAGAATATGCGTTCTCACCTTGCTAGGAAGTACTATAAACAATTACAGTCCTCTGTCCTTGTTGTGCAGACAGGTTTCCGAGCAATGGTGGCCCGTGATGCCTTGAGAAGAATTAGAATGCAAACCAGCGCTTCAGTTCTTGTTCAGGATTCCGAGGAAAACTTTGAAAATGAAAGAGCAACTAACGAAGAACCCACAAGTCCCACTAAAGAAGAACCCTCAAGTCCCTCTGTGGAAGAATCCACAACTCTCACTAACGAAGAACTCACAAGTCCCGCCAAGGAAGGACCTGCAAGTCTCATTAAGAAAGAACACTCGAGTAATGCTATGGAAGAAACGTCAAGTCTCACCGACTTTGAAGTTTCAGAGGCAATGCTTGAAAACAGAAGCCCATCTATAGAGGAACCCACAAGTCCAGATAAAGATGGTGAAAAGATGCGGGCTCTTGCTGCTGAAGTAAGCAGTCTGAAGGCGAAGTTACAAGCAGAAAAACAAAGAGCAGATGTATGTGAAAGAAAATATACAGAAGCCAAACAATCTAACGAGGAGATGCAGAAAAAATTAGGAGAAACTGAAAGAAGAGTGCTTCAACTTCAGGACTCATTGAACAGTGTGTTGCAGGATGATTTGTTCAATGACAAGCCAAGTTTCAGAACTCAAAATGATCTTGAGTACTTCGTCCAGATTGAGTTCAACTTTCCGACCGATTGCTAG 3090 0.4036 MGAADNNIVVGSHVWVEDASLVWVDGQVVQINGDKAEIQTSNEQKVVAKLSKLYPKDTDSPEGGVDDMTKLAYLHEPGVLHNLATRYQMNEIYTYTGNILIAINPFQRLQHLYDIDTMKCYKGLPLGQLSPHVFAIADAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAFVGGHRGGEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKAGRISGAAIRTYLLEKSRVCQISDTERNYHCFYLLCAAPSEERERYKLGDPKSFHYLNQSNCYKLDGVDDAKEYITTKRAMEIVGINQHEQDSIFRVVAAILHLGNIRFTKGDESDSSVLEDDQSKFHLKVTAELLMCDPGKLEDALCKRLMVTPEEVIKRSLDPLAAATSRDGLAKIIYSRLFDWLVNKVNISIGQDKSSNYLIGVLDIYGFESFITNSFEQFCINFTNEKLQQHFNQHVFKFEQEEYTKEGIDWSYLEFVDNQDVLDLIEKKPGGIISLLDEACMFPKSTPETFTEKLYQTFSNHKRFIRPKLARSEFTIVHYAGDVKYQSDQFLDKNKDYIVVEHQDLLSSSTCSFVAGLFPPVTEESSKPSKFSSIGSRFKLQLQQLMETLHSTEPHYIRCVKPNSLLKPAVLENMNIIQQLRSGGVLEAVRIKCAGFPTHRAFPEFLSRFHLLAPDVLSENFDEKDACKMILEKIGLAGYQIGKTQVFLRAGQMAELDALRTSLFNNSAVVIQSRSRTYIAQKKYLRLKEACICIQLICRGQLARKFYEIKKKEAASIRIQKNMRSHLARKYYKQLQSSVLVVQTGFRAMVARDALRRIRMQTSASVLVQDSEENFENERATNEEPTSPTKEEPSSPSVEESTTLTNEELTSPAKEGPASLIKKEHSSNAMEETSSLTDFEVSEAMLENRSPSIEEPTSPDKDGEKMRALAAEVSSLKAKLQAEKQRADVCERKYTEAKQSNEEMQKKLGETERRVLQLQDSLNSVLQDDLFNDKPSFRTQNDLEYFVQIEFNFPTDC* 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00452 1029 ProSiteProfiles Myosin motor domain profile. 63 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte13g00452 1029 Pfam Myosin N-terminal SH3-like domain 11 51 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pte13g00452 1029 FunFam Myosin 2 313 434 - -
Pte13g00452 1029 FunFam unconventional myosin-Va 786 834 - -
Pte13g00452 1029 PRINTS Myosin heavy chain signature 197 224 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte13g00452 1029 PRINTS Myosin heavy chain signature 93 112 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte13g00452 1029 PRINTS Myosin heavy chain signature 483 511 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte13g00452 1029 PRINTS Myosin heavy chain signature 150 175 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte13g00452 1029 PRINTS Myosin heavy chain signature 430 458 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte13g00452 1029 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 9 58 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pte13g00452 1029 Gene3D Myosin VI head, motor domain, U50 subdomain 313 602 - -
Pte13g00452 1029 MobiDBLite consensus disorder prediction 841 910 - -
Pte13g00452 1029 Gene3D - 440 624 - -
Pte13g00452 1029 Pfam IQ calmodulin-binding motif 761 777 IPR000048 GO:0005515
Pte13g00452 1029 Pfam IQ calmodulin-binding motif 738 756 IPR000048 GO:0005515
Pte13g00452 1029 Pfam IQ calmodulin-binding motif 786 805 IPR000048 GO:0005515
Pte13g00452 1029 Gene3D - 667 734 - -
Pte13g00452 1029 Gene3D - 736 784 - -
Pte13g00452 1029 Gene3D - 785 837 - -
Pte13g00452 1029 MobiDBLite consensus disorder prediction 919 938 - -
Pte13g00452 1029 ProSiteProfiles IQ motif profile. 759 788 IPR000048 GO:0005515
Pte13g00452 1029 MobiDBLite consensus disorder prediction 844 858 - -
Pte13g00452 1029 CDD MYSc_Myo11 77 721 IPR036018 -
Pte13g00452 1029 Gene3D Kinesin motor domain 66 663 IPR036961 -
Pte13g00452 1029 SMART MYSc_2a 57 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte13g00452 1029 SMART iq_5 735 757 IPR000048 GO:0005515
Pte13g00452 1029 SMART iq_5 783 805 IPR000048 GO:0005515
Pte13g00452 1029 SMART iq_5 806 828 IPR000048 GO:0005515
Pte13g00452 1029 SMART iq_5 758 780 IPR000048 GO:0005515
Pte13g00452 1029 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 787 IPR027417 -
Pte13g00452 1029 Pfam Myosin head (motor domain) 65 721 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte13g00452 1029 MobiDBLite consensus disorder prediction 859 884 - -
Pte13g00452 1029 ProSiteProfiles IQ motif profile. 807 836 IPR000048 GO:0005515
Pte13g00452 1029 Gene3D - 253 311 - -
Pte13g00452 1029 PANTHER MYOSIN 55 993 - -
Pte13g00452 1029 ProSiteProfiles IQ motif profile. 737 762 IPR000048 GO:0005515
Pte13g00452 1029 ProSiteProfiles IQ motif profile. 784 811 IPR000048 GO:0005515
Pte13g00452 1029 FunFam Myosin heavy chain 253 308 - -
Pte13g00452 1029 FunFam Class V myosin 440 586 - -
Pte13g00452 1029 Coils Coil 938 993 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00452 Pte-Chr13 3321298 3333501 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00452 7 997 Myosins gene family AT1G54560 63.883 0.0 1349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00452 K10357 - qsa:O6P43_010538 1384.78