Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte13g00450 | ATGTTTGGAACGAGAAAGTTGGATGAGACGTTTTGGTTGAAATATGACGATAAGGCTATGGTGGAAAATGTGCTGGGTACTGAAGCATGCGAGTATTTGATTTCCACTGCATCAAATAATGTCTTAGGTGATGTCAATACATCTGGTGGTGATTTGGGTGTTCAGAAGAGGTTGTCACAGCTTGTTGAACGTTCTAGTTGGAACTACGCTATTTTCTGGAAGGTTGTGGGGTTGAAATCGGGTGTACCTGCTTTGATTTGGGGTGATGGCCATTGTAAAGACCCGGGTGCCGGTAAAAATGGAGGTGACGGTTCAGATGAACCAAGTGAAATGGGAAGAGCTGGTACGAGAGATGAATTGAAGAGGCAGGTTCTTCAAAAGATTCATGCTTGTTTTAATGGGTCCGAAGAGGATAATTATACTAAAAGGATGGATAGGGTTTCAGATGTGGAGATGTTTTACTTAACATCTATGTACTATGCATTCCGGCTGGAATCACCATATGGTCCTGGTAACTCTTTTCGTTCTGGTCAAGCCATTTGGGCTGTAGATGTGGCTAGTTGTTCAAATCAACACGAGTCGAGGTCATTTCTTGGACGATTCGCCGGGTTCCAGACAGTGGTTTTTGTACCTCTAAAAGCTGGAGTGGTGGAGCTTGGTTCACTAAGGAGGATACCCGAAGAACAGGATATTGTGGAAATGGTTAGAATGATATTCAGGGAATCTGATCCCGGAGAGTCAAGGGTGTTCCCCAAGATTTTTGGGCATGAATTGAGTGTGGGTGATGCGAAGTCTCATTCAATGACTATAAGCTTCTCTCCTAAGGTAGAAGATGACCCTTCTGATTCCTGTGAAGCGCCAATGAATGCAAATCACATTCATGGGAATTCTTCCAATGGGATACAAGGGAACACTCGTGATGCAACCATTTTTCCAAGGTCTAATCAGATAGTTGTTGGTAATTTTGATGCTCAATCGACAATTTCCTATATCGAGCTGACTAAGGATGAGTCATCCGCTCTGCCTGATGACCGGAAACCAAGGAAAAGGGGGAGAAAGCCTGCGAATGGTAGAGAGGAGCCTTTGAATCATGTGGAAGCTGAGAGGCAGAGGCGTGAGAAGCTTAATCAGAGGTTTTATGCCTTACGAGCTATTGTTCCCAACATCTCTAAGATGGATAAGGCATCCTTGCTTGGTGATGCCATTTCATATATTACTGATCTACAGATGAAAATAAAGGTCTTGGAGACTGAAAGAGAGATGGTTACCGACAATCATGATGAGCGTTCATGGTTGCCCAATTTGGATTTCCAGGTAAGACAAGATGAAGCAGTTGTGAGAATGAGCTGTCCCTTGGATTCTCATCCTGTTTCAAAAGTCATTAGAACTTTCGAAGAACATCAGATTTTAGCTCAAGATTCCAGTGTAGCCACAGCTGATGATAAAATAATTCATACGTTCTCCATTCAAACCCAAGATGGTGATGCTAACCAGTTGAAGGACAAACTTGTTGCTGCCCTCTCGAAATAA | 1530 | 0.4314 | MFGTRKLDETFWLKYDDKAMVENVLGTEACEYLISTASNNVLGDVNTSGGDLGVQKRLSQLVERSSWNYAIFWKVVGLKSGVPALIWGDGHCKDPGAGKNGGDGSDEPSEMGRAGTRDELKRQVLQKIHACFNGSEEDNYTKRMDRVSDVEMFYLTSMYYAFRLESPYGPGNSFRSGQAIWAVDVASCSNQHESRSFLGRFAGFQTVVFVPLKAGVVELGSLRRIPEEQDIVEMVRMIFRESDPGESRVFPKIFGHELSVGDAKSHSMTISFSPKVEDDPSDSCEAPMNANHIHGNSSNGIQGNTRDATIFPRSNQIVVGNFDAQSTISYIELTKDESSALPDDRKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAIVPNISKMDKASLLGDAISYITDLQMKIKVLETEREMVTDNHDERSWLPNLDFQVRQDEAVVRMSCPLDSHPVSKVIRTFEEHQILAQDSSVATADDKIIHTFSIQTQDGDANQLKDKLVAALSK* | 510 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte13g00450 | 509 | Gene3D | - | 352 | 425 | IPR036638 | GO:0046983 | |
Pte13g00450 | 509 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 359 | 408 | IPR011598 | GO:0046983 | |
Pte13g00450 | 509 | Pfam | Helix-loop-helix DNA-binding domain | 363 | 409 | IPR011598 | GO:0046983 | |
Pte13g00450 | 509 | Pfam | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 55 | 239 | IPR025610 | - | |
Pte13g00450 | 509 | MobiDBLite | consensus disorder prediction | 96 | 116 | - | - | |
Pte13g00450 | 509 | MobiDBLite | consensus disorder prediction | 290 | 307 | - | - | |
Pte13g00450 | 509 | MobiDBLite | consensus disorder prediction | 338 | 370 | - | - | |
Pte13g00450 | 509 | CDD | bHLH_AtAIB_like | 356 | 420 | - | - | |
Pte13g00450 | 509 | MobiDBLite | consensus disorder prediction | 273 | 307 | - | - | |
Pte13g00450 | 509 | Coils | Coil | 405 | 425 | - | - | |
Pte13g00450 | 509 | SMART | finulus | 365 | 414 | IPR011598 | GO:0046983 | |
Pte13g00450 | 509 | PANTHER | MYC | 28 | 506 | IPR045084 | GO:0003700|GO:0006355 | |
Pte13g00450 | 509 | FunFam | Transcription factor bHLH13 | 352 | 426 | - | - | |
Pte13g00450 | 509 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 362 | 425 | IPR036638 | GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte13g00450 | Pte-Chr13 | 3280234 | 3282692 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte13g00450 | 7 | 510 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT4G16430 | 47.937 | 1.08e-160 | 462 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Pte13g00450 | bHLH-MYC_N | 5.2e-43 | CL0161 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte13g00450 | - | - | qsu:111999675 | 624.009 |