Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00450 ATGTTTGGAACGAGAAAGTTGGATGAGACGTTTTGGTTGAAATATGACGATAAGGCTATGGTGGAAAATGTGCTGGGTACTGAAGCATGCGAGTATTTGATTTCCACTGCATCAAATAATGTCTTAGGTGATGTCAATACATCTGGTGGTGATTTGGGTGTTCAGAAGAGGTTGTCACAGCTTGTTGAACGTTCTAGTTGGAACTACGCTATTTTCTGGAAGGTTGTGGGGTTGAAATCGGGTGTACCTGCTTTGATTTGGGGTGATGGCCATTGTAAAGACCCGGGTGCCGGTAAAAATGGAGGTGACGGTTCAGATGAACCAAGTGAAATGGGAAGAGCTGGTACGAGAGATGAATTGAAGAGGCAGGTTCTTCAAAAGATTCATGCTTGTTTTAATGGGTCCGAAGAGGATAATTATACTAAAAGGATGGATAGGGTTTCAGATGTGGAGATGTTTTACTTAACATCTATGTACTATGCATTCCGGCTGGAATCACCATATGGTCCTGGTAACTCTTTTCGTTCTGGTCAAGCCATTTGGGCTGTAGATGTGGCTAGTTGTTCAAATCAACACGAGTCGAGGTCATTTCTTGGACGATTCGCCGGGTTCCAGACAGTGGTTTTTGTACCTCTAAAAGCTGGAGTGGTGGAGCTTGGTTCACTAAGGAGGATACCCGAAGAACAGGATATTGTGGAAATGGTTAGAATGATATTCAGGGAATCTGATCCCGGAGAGTCAAGGGTGTTCCCCAAGATTTTTGGGCATGAATTGAGTGTGGGTGATGCGAAGTCTCATTCAATGACTATAAGCTTCTCTCCTAAGGTAGAAGATGACCCTTCTGATTCCTGTGAAGCGCCAATGAATGCAAATCACATTCATGGGAATTCTTCCAATGGGATACAAGGGAACACTCGTGATGCAACCATTTTTCCAAGGTCTAATCAGATAGTTGTTGGTAATTTTGATGCTCAATCGACAATTTCCTATATCGAGCTGACTAAGGATGAGTCATCCGCTCTGCCTGATGACCGGAAACCAAGGAAAAGGGGGAGAAAGCCTGCGAATGGTAGAGAGGAGCCTTTGAATCATGTGGAAGCTGAGAGGCAGAGGCGTGAGAAGCTTAATCAGAGGTTTTATGCCTTACGAGCTATTGTTCCCAACATCTCTAAGATGGATAAGGCATCCTTGCTTGGTGATGCCATTTCATATATTACTGATCTACAGATGAAAATAAAGGTCTTGGAGACTGAAAGAGAGATGGTTACCGACAATCATGATGAGCGTTCATGGTTGCCCAATTTGGATTTCCAGGTAAGACAAGATGAAGCAGTTGTGAGAATGAGCTGTCCCTTGGATTCTCATCCTGTTTCAAAAGTCATTAGAACTTTCGAAGAACATCAGATTTTAGCTCAAGATTCCAGTGTAGCCACAGCTGATGATAAAATAATTCATACGTTCTCCATTCAAACCCAAGATGGTGATGCTAACCAGTTGAAGGACAAACTTGTTGCTGCCCTCTCGAAATAA 1530 0.4314 MFGTRKLDETFWLKYDDKAMVENVLGTEACEYLISTASNNVLGDVNTSGGDLGVQKRLSQLVERSSWNYAIFWKVVGLKSGVPALIWGDGHCKDPGAGKNGGDGSDEPSEMGRAGTRDELKRQVLQKIHACFNGSEEDNYTKRMDRVSDVEMFYLTSMYYAFRLESPYGPGNSFRSGQAIWAVDVASCSNQHESRSFLGRFAGFQTVVFVPLKAGVVELGSLRRIPEEQDIVEMVRMIFRESDPGESRVFPKIFGHELSVGDAKSHSMTISFSPKVEDDPSDSCEAPMNANHIHGNSSNGIQGNTRDATIFPRSNQIVVGNFDAQSTISYIELTKDESSALPDDRKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAIVPNISKMDKASLLGDAISYITDLQMKIKVLETEREMVTDNHDERSWLPNLDFQVRQDEAVVRMSCPLDSHPVSKVIRTFEEHQILAQDSSVATADDKIIHTFSIQTQDGDANQLKDKLVAALSK* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00450 509 Gene3D - 352 425 IPR036638 GO:0046983
Pte13g00450 509 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 359 408 IPR011598 GO:0046983
Pte13g00450 509 Pfam Helix-loop-helix DNA-binding domain 363 409 IPR011598 GO:0046983
Pte13g00450 509 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 55 239 IPR025610 -
Pte13g00450 509 MobiDBLite consensus disorder prediction 96 116 - -
Pte13g00450 509 MobiDBLite consensus disorder prediction 290 307 - -
Pte13g00450 509 MobiDBLite consensus disorder prediction 338 370 - -
Pte13g00450 509 CDD bHLH_AtAIB_like 356 420 - -
Pte13g00450 509 MobiDBLite consensus disorder prediction 273 307 - -
Pte13g00450 509 Coils Coil 405 425 - -
Pte13g00450 509 SMART finulus 365 414 IPR011598 GO:0046983
Pte13g00450 509 PANTHER MYC 28 506 IPR045084 GO:0003700|GO:0006355
Pte13g00450 509 FunFam Transcription factor bHLH13 352 426 - -
Pte13g00450 509 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 362 425 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00450 Pte-Chr13 3280234 3282692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00450 7 510 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G16430 47.937 1.08e-160 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte13g00450 bHLH-MYC_N 5.2e-43 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00450 - - qsu:111999675 624.009