Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00429 ATGGTTAACGTCCACCGTGAGTACTCCTCAGGGGTGAACATGGAGGAGTGTGCGCACAAAGTTGCTGTTCCACCGCCACAACCCTTTCTGAAATCTCTCAAGTACTCTCTCAAAGAGACTTTCTTCCCTGATGACCCATTAAGGCAGTTCAAACACCAGCCACCATGTAAAAAGTTTATACTTGGTCTCCAATTCTTCTTCCCGATTCTTGAATGGGCACCGCGCTACACTTTGCAGTTCTTGAAAGCTGACATCATTTCTGGGATCACCATCGCCAGCTTGGCTATTCCTCAAGGCATCAGTTATGCCAAGCTTGCCAACTTGCCTCCAATTCTTGGACTGTATTCCAGCTTCATACCTCCATTGATTTATTCCATGATGGGAAGCTCAAGGGATTTGGCTGTGGGAACTGTGGCTGTTGCTTCCCTTCTCATTGCCTCCATGTTGGGGAATGAAGTGAATCCGAAAGAAAATCCAAAGCTTTACCTCCACCTTGCTTTCACCGCTACATTTTTTGCTGGGGTCCTCCATGCCTCTTTAGGTTTGCTAAGGTTAGGGTTTATCGTGGATTTTCTGTCACATGCAACTATTGTAGGGTTCATGGCAGGAGCAGCCACGATAGTTTGTCTGCAACAGTTAAAAGGGATTTTTGGCCTTGAGCATTTCACGCATTCTACCGACGTAGTTTCTGTACTCCGTTCTGTCTTTAGCCAAACACACGAGTGGAGGTGGGAAAGCGCTGTCTTGGGGTGTTGCTTCCTTTTCTTTCTCCTCCTCACCAGATACTTTAGCAAAAGACAGCCAAAGTTCTTTTGGGTATCAGCAATGGCGCCGTTAACATCAGTTATCTTGGGAAGTCTGCTTGTTTATGTCACCCATGCTGAAAGGCATGGCGTTCAAGTGATAGGGGACTTGAAGAAGGGACTGAATCCTCCATCTTTCTCTGATCTGGTATTTGCATCTCCTCATATGTCCGTTGCTATGAAAGTTGGTATTATCACGGGAGTTATAGCGCTAGCAGAAGGAATAGCAGTGGGAAGAAGCTTCGCTATGTTAAAAAATTACCATATAGATGGAAACAAAGAGATGATAGCCATTGGGACCATGAATATAATTGGTTCTTGCACTTCTTGCTATATCACAACAGGACCCTTTTCGCGATCAGCTGTGAACTACAATGCAGGATGCAAGACAGCAGCATCAAACATAGTAATGGCAATTGCAGTGATGTTAACATTGTTATTCTTGACACCCTTGTTCCATTACACTCCCCTAGTGGTACTCTCAGCGATTATTATATCCGCAATGCTTGGACTCATAGATTACGAAGCAGCCATCCATCTCTGGCATGTCGACAAATTTGATTTCGCTGTGTGCATTAGCGCTTACATTGGTGTGGTATTTGGAAGTGTCCAAATGGGCCTAGTCATAGCTGTTGGAATGTCTGTGCTTAGGGTGCTTCTATTTGTTGCAAGGCCCAAAACCTCTGTGCTAGGGAACATACCCAATTCCATAATATACAGAAATGTCGAACAGTATCCAAACGCAAAAAGTGTTCCAGGAGTCCTCATTCTTGAAATTTTTGCTCCAATTTATTTTGCTAATGCAGGCTACTTGAGAGAGAGGATCGAAAGGTGGATTGATGAAGAGGAAGACAGGATTAAATCTTCAGGGGAGACCAGCCTACACTATGTCATATTGGATATGAGTGCTGTTGGAAACATGGATACAAGTGGAGTTAGCATGCTTGAGGAGGTCAAGAAGATAACAGAAAGAAGAGAGCTCAAGCTTCTTTTAGCCAATCCTGGAGCAGAAGTGATGAAGAAGCTCAACAAGTCTAAGTTCATAGAGAATTTAGGCAAAGAATGGATTTACTTAACTGTCCAAGAGGCTGTTGGAGCCTGCAACTTCATGCTTCACACGGGCAAACCGTACCCCATGAAAGGCGACTCAGAGACATGGAACGCTGTCTGA 1974 0.4448 MVNVHREYSSGVNMEECAHKVAVPPPQPFLKSLKYSLKETFFPDDPLRQFKHQPPCKKFILGLQFFFPILEWAPRYTLQFLKADIISGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYSMMGSSRDLAVGTVAVASLLIASMLGNEVNPKENPKLYLHLAFTATFFAGVLHASLGLLRLGFIVDFLSHATIVGFMAGAATIVCLQQLKGIFGLEHFTHSTDVVSVLRSVFSQTHEWRWESAVLGCCFLFFLLLTRYFSKRQPKFFWVSAMAPLTSVILGSLLVYVTHAERHGVQVIGDLKKGLNPPSFSDLVFASPHMSVAMKVGIITGVIALAEGIAVGRSFAMLKNYHIDGNKEMIAIGTMNIIGSCTSCYITTGPFSRSAVNYNAGCKTAASNIVMAIAVMLTLLFLTPLFHYTPLVVLSAIIISAMLGLIDYEAAIHLWHVDKFDFAVCISAYIGVVFGSVQMGLVIAVGMSVLRVLLFVARPKTSVLGNIPNSIIYRNVEQYPNAKSVPGVLILEIFAPIYFANAGYLRERIERWIDEEEDRIKSSGETSLHYVILDMSAVGNMDTSGVSMLEEVKKITERRELKLLLANPGAEVMKKLNKSKFIENLGKEWIYLTVQEAVGACNFMLHTGKPYPMKGDSETWNAV* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00429 657 FunFam Sulfate transporter 31 492 638 - -
Pte13g00429 657 Pfam Sulfate permease family 81 461 IPR011547 GO:0016020
Pte13g00429 657 SUPERFAMILY SpoIIaa-like 514 635 IPR036513 -
Pte13g00429 657 CDD STAS_SulP_like_sulfate_transporter 513 628 - -
Pte13g00429 657 Pfam STAS domain 513 631 IPR002645 -
Pte13g00429 657 Gene3D STAS domain 492 637 IPR036513 -
Pte13g00429 657 PANTHER SULFATE TRANSPORTER 30 637 IPR001902 GO:0016020|GO:0055085
Pte13g00429 657 ProSitePatterns SLC26A transporters signature. 110 131 IPR018045 GO:0008271|GO:0008272
Pte13g00429 657 NCBIfam sulfate permease 68 631 IPR001902 GO:0016020|GO:0055085
Pte13g00429 657 ProSiteProfiles STAS domain profile. 512 635 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00429 Pte-Chr13 3098819 3103797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00429 19 644 Inorganic Solute Cotransporters AT4G02700 71.611 0.0 922
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00429 K17471 - rcu:8275411 1090.87