Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00421 ATGCCTAGCGCCATTGGAAGAAACTTAATCAAGCTCTGTTTCGTAAAGATAAAAAGTCCATTAGCAATTACTCAATCCTCTTCCTCTGTTCCCAATTCAGCAGATCCAGACCTTCAAAACCGTCCACGTGCCACCAAGAATAACGGGACTCGTCCCTGTGCCAACATTTGCTCATCGATCTTCGCAAAAAATTTCAACTCCTTATATGACAATACTTGTGACTACGCCTCCAAAACTTTGACGAATACCTCTTCCGATCTATCTAACACTTCCACTGCCTCCTCCTCAACCTCTTCTCCTGAACCTGAGGCTGATCTTGAACCTGCTGACTTTGCCACTGTCTTTGCCTCCAACCGCTTCTTCTTCTCTTCACCTGGTCGTACCAACTCCATCATTGAATCTACAAATAATAGTGTAGAATGCTGTATCTACTCATCCTCATCATCGTCCATGGCAGTCACTCTTCCGTGCAAGAATAGTAACAACAACAATAAGCTCATCCTAGACACAAGCACGGCTGTGCCCACGTATTCTCCAGACCCATATGCAGATTTTCGGAGGTCCATGCAGGAGATGGTCGAGGCTCGTGCAAGTATAGAGCCAGCAGCCGTGGACGTCAAGTACAACTGGGAATTTTTGCATGAGCTTCTTCTATACTACCTTGCCCTCAATCCCCATCCCACCCACAAGTTCATCGTGCATGCTTTTTCCGATCTTCTGGTAACCCTAACGACCTCGGTGCCAGACGTCCGTGTCCCCGCCGACCATGGGGGTTGGTGA 780 0.4756 MPSAIGRNLIKLCFVKIKSPLAITQSSSSVPNSADPDLQNRPRATKNNGTRPCANICSSIFAKNFNSLYDNTCDYASKTLTNTSSDLSNTSTASSSTSSPEPEADLEPADFATVFASNRFFFSSPGRTNSIIESTNNSVECCIYSSSSSSMAVTLPCKNSNNNNKLILDTSTAVPTYSPDPYADFRRSMQEMVEARASIEPAAVDVKYNWEFLHELLLYYLALNPHPTHKFIVHAFSDLLVTLTTSVPDVRVPADHGGW* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00421 259 Pfam Transcriptional repressor, ovate 178 243 IPR006458 -
Pte13g00421 259 MobiDBLite consensus disorder prediction 84 102 - -
Pte13g00421 259 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 66 243 IPR038933 GO:0045892
Pte13g00421 259 NCBIfam uncharacterized plant-specific domain TIGR01568 173 244 IPR006458 -
Pte13g00421 259 MobiDBLite consensus disorder prediction 84 105 - -
Pte13g00421 259 ProSiteProfiles OVATE domain profile. 174 242 IPR006458 -
Pte13g00421 259 MobiDBLite consensus disorder prediction 25 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00421 Pte-Chr13 3045719 3046530 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pte13g00421 Ovate 1.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00421 - - tcc:18613327 182.57