Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00420 ATGGCTACGGCGGCGGAGAAGGCAGTCACCATACGAACAAGGAAATTCATGACTAACCGTCTTCTTTCCAGAAAACAATTCGTAATTGATGTTCTGCATCCTGGAAGACCAAATGTCTCGAAGGCTGAGTTAAAGGAAAAACTGGCCAGGATGTACGATGTGAAAGATGCAAATTCTATCTTTGTTTTCAAGTTCCGCACCCATTTCGGAGGTGGGAAATCAACTGGATTTGGTTTGATCTATGATTCAGTCGAGAACGCAAAGAAGTATGAGCCCAAGTACAGGCTTATAAGGAATGGATTAGCTACAAAGGTTGAGAAGTCAAGGAAGCAAATGAAGGAAAGAAAGAACAGAGCTAAAAAGATCCGTGGAGTAAAGAAAACAAAGGCTGGTGATGCTGCCAAGGGTGGAAAGAAGAAATGA 423 0.4255 MATAAEKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARMYDVKDANSIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLATKVEKSRKQMKERKNRAKKIRGVKKTKAGDAAKGGKKK* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00420 140 MobiDBLite consensus disorder prediction 105 140 - -
Pte13g00420 140 Pfam Ribosomal protein S24e 28 106 IPR001976 GO:0003735|GO:0005840|GO:0006412
Pte13g00420 140 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 9 111 IPR012678 GO:0003735|GO:0005840|GO:0006412
Pte13g00420 140 Coils Coil 102 122 - -
Pte13g00420 140 Hamap 30S ribosomal protein S24e [rps24e]. 7 109 IPR001976 GO:0003735|GO:0005840|GO:0006412
Pte13g00420 140 PANTHER 40S RIBOSOMAL PROTEIN S24 7 134 IPR001976 GO:0003735|GO:0005840|GO:0006412
Pte13g00420 140 ProSitePatterns Ribosomal protein S24e signature. 69 91 IPR018098 -
Pte13g00420 140 Gene3D - 2 135 - -
Pte13g00420 140 FunFam 40S ribosomal protein S24 5 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00420 Pte-Chr13 3041676 3043626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00420 5 135 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 87.786 1.41e-82 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00420 K02974 - csv:101209776 234.572