Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00373 ATGGAGTTCAGAAGTAAGTACTCTGGAGGTCACCTGTGCCAATGCTTGAGCCGCTTGTCAACTCAACGTGGCGATTCCGTCGTCACAATCTTTGGTGACCACAGAAAGACCGGAGAGAAGTTCGTGGAGGACGTGCTTAGCCTTGCTCGTGGCCTGGTTGACTTGGGAATTCGCCAAGGCGATGTGGTTGCTATCTCTGCTTTCAACAGTGATATGTATCTGGAGTGGTTACTAGCTGTAGCATTTGTTGGAGGAATATCAGCCCCTCTGAACTATCGTTGGAGTTTTGAGGAGGCAGGAAGGGCGATGATGGTGGCTAGGCCAGTAATTCTGGTGGCTGATGACAGCTGTCAGTCCTGGTATTCTAATCTCCGGGACACTCACTTATCCTCTATAAAGTGGTTTGTGTCTTTGGGTTCGCATCCTTCAAATTTCAAGAGGAGGACGAAGGTATTGACTCCTGAAATGCTTAAGAAGTACTCCATGAAGCCTCTTCTTTTCAACTATTCTTGGGCCCCTGAAGGTGCTGCTATTATTTGCTTTACCTCAGGAACCACTGGAGAGCCTAAAGGAGTTACTATCAGCCATGGCGCTTTGATCGTACAATCTCTAGCAAAGCTATCCGTTGTTGCTTACAGTGAGGATGATGTATATCTTCATACAGCTCCCTTGTGCCACATTGGTGGTTTATCATCAGCCATGGCCATGCTTATGGTGGGAGGTTGCCATATTTTGATTCCCAAATTTGAGCCCAAAGCAGCCCTTGAAGCCATAGAGCAACACTGTGTGACATCTTTTATTGCGGTCCCTGCAATGATGGCTGACTTAATTGATTTTGTGAGGAAGAAGGAAATCTGCAAAAGAGAAACTGTTAATAAGATATTAAATGGAGGTGGTGCCCTCTCAACTGAACTCATTAAAGACACAACCCTCTTCTTTCCAAAAGCTAAGCTTATCTCTGCTTATGGGATGACTGAGGCATGCTCGTCTCTTACATTCATCACTCTCCATGATCCAACGAATAAAACCTCCTCCATGCCCTTTCTGATGATTCCCAGCAAAATATCTGCCGTGTCTCACCAGCCACAAGGTATCTGTGTTGGCAAGCCTGCACCCCATGTAGAAATGAAGATATGTGGTGACGAGTTTAGTACCGATGTTGGAAGAATATTAACTAGAGGACCTCACGTTATGCTCAGATATTGGGGTGCGATTCCAACAATGCCATCAGATTCCAGCAATGAAGATTGGCTCGACACAGGTGACATTGGATCAATTGATAAGCACGGTAACCTATGGCTAATTGGAAGAAATAAAGACCGAATCAAGAGTGGTGGAGAGAATGTTTATCCTGAAGAGGTTGAGACTATCCTAAAGCAACATCCAGGAGTTGCTAGTGTTGTAGTTGTAGGAGTTCCAGAAACTCGCCTGACGGAGATGGTTGTAGCTTGCATCCAGCTTGAAGAAAATTGGGAATGGTCACAACATTCTGTTTCCCATGCAGAGTGTCAGCTAAGCAGAGAATACCTCCGAAACTACTGCAAAGAAAATGATTTAAGCGGGTTCAAGATACCAAAGGAATTTATAGTAAGGAGCAAACCATTTCCACTGACAACCTCAGGAAAAGTTCGAAGGGACCAAATCAGAACGGAAGTTATTATGCAGCTGCAGTACTTCAAAAGCAATCTATGA 1692 0.4486 MEFRSKYSGGHLCQCLSRLSTQRGDSVVTIFGDHRKTGEKFVEDVLSLARGLVDLGIRQGDVVAISAFNSDMYLEWLLAVAFVGGISAPLNYRWSFEEAGRAMMVARPVILVADDSCQSWYSNLRDTHLSSIKWFVSLGSHPSNFKRRTKVLTPEMLKKYSMKPLLFNYSWAPEGAAIICFTSGTTGEPKGVTISHGALIVQSLAKLSVVAYSEDDVYLHTAPLCHIGGLSSAMAMLMVGGCHILIPKFEPKAALEAIEQHCVTSFIAVPAMMADLIDFVRKKEICKRETVNKILNGGGALSTELIKDTTLFFPKAKLISAYGMTEACSSLTFITLHDPTNKTSSMPFLMIPSKISAVSHQPQGICVGKPAPHVEMKICGDEFSTDVGRILTRGPHVMLRYWGAIPTMPSDSSNEDWLDTGDIGSIDKHGNLWLIGRNKDRIKSGGENVYPEEVETILKQHPGVASVVVVGVPETRLTEMVVACIQLEENWEWSQHSVSHAECQLSREYLRNYCKENDLSGFKIPKEFIVRSKPFPLTTSGKVRRDQIRTEVIMQLQYFKSNL* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00373 563 Pfam AMP-binding enzyme 21 444 IPR000873 -
Pte13g00373 563 Gene3D - 440 554 IPR045851 -
Pte13g00373 563 ProSitePatterns Putative AMP-binding domain signature. 179 190 IPR020845 -
Pte13g00373 563 CDD AFD_class_I 177 544 - -
Pte13g00373 563 PANTHER ACYL-COA SYNTHETASE 36 551 - -
Pte13g00373 563 SUPERFAMILY Acetyl-CoA synthetase-like 11 551 - -
Pte13g00373 563 Gene3D - 2 439 IPR042099 -
Pte13g00373 563 Pfam AMP-binding enzyme C-terminal domain 453 542 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00373 Pte-Chr13 2696703 2700012 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00373 48 471 Monolignol Biosynthesis Gene Families AT3G21240 29.680 1.29e-37 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00373 K14760 - cave:132171611 754.977