Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00371 ATGTCAAATTCAGAAAGAACTACGAACGGCTCCACCATTGAACCTAATAGACAGCAGTCTTCCGTTAACGTTAACGGTAACGGAACCGGACCTCTAGTTGTCAAGAAGCCTCCGTCTAAGGACCGTCACAGTAAGGTCGACGGCCGGGGACGACGTATACGTATGCCCATCATTTGCGCCGCGCGTGTTTTTCAACTTACGCGCGAGTTGGGACATAAATCCGACGGTCAGACGATTGAGTGGCTTCTCCGTCAAGCCGAGCCCTCTATCATAGCCGCGACAGGTACTGGCACTACTCCAGCTAGCTTCTCTACTGTCTCCGTCTCCGTTCGAGGTGGTTCTGTTGGAGGTGGTTCTACCACTCTTTCCTCAACTACGTCTTCGACTAGCCCGCTTGAGCATAAGCCCTTACTTGGTCCGACGCCATTCATTCTCGGTAAGCGCATAAGGGCCGAGGAAGACGCCGACAAGGATAACGGTGGAGGGGGTGGCGTGGTTGCCTTGGGACCCACCGTGGGGACGTTGGTTGGACCCACTGCCGCACATGCCGGACTATGGGCCCTTCCGTCCAGACCGGACTTTGGTCAAGTATGGAGTTTTGCAGCAGCGGCCGCCCCAACTCCAGAATTGGTGGTGCAGCAGGCAGTGACAGCATCTCAGCAAAATCAGCACGCATCTCTCTTCCTCCATCATCAGCACCAGCAGCAATCAATGGGGGAAGCATCAGCGGCGAGGCTGGGAAATTACCTTCCTGGGCATTTAAATTTGTTGGCTTCATTGTCTGAAGGGCATGGGAATTCTGGTAGGAGAGACGATGAGCACCGTTGA 828 0.5447 MSNSERTTNGSTIEPNRQQSSVNVNGNGTGPLVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGSVGGGSTTLSSTTSSTSPLEHKPLLGPTPFILGKRIRAEEDADKDNGGGGGVVALGPTVGTLVGPTAAHAGLWALPSRPDFGQVWSFAAAAAPTPELVVQQAVTASQQNQHASLFLHHQHQQQSMGEASAARLGNYLPGHLNLLASLSEGHGNSGRRDDEHR* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00371 275 Pfam TCP family transcription factor 39 115 IPR017887 -
Pte13g00371 275 MobiDBLite consensus disorder prediction 114 134 - -
Pte13g00371 275 MobiDBLite consensus disorder prediction 36 51 - -
Pte13g00371 275 ProSiteProfiles TCP domain profile. 39 93 IPR017887 -
Pte13g00371 275 MobiDBLite consensus disorder prediction 1 28 - -
Pte13g00371 275 MobiDBLite consensus disorder prediction 114 137 - -
Pte13g00371 275 MobiDBLite consensus disorder prediction 1 51 - -
Pte13g00371 275 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 6 251 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00371 Pte-Chr13 2682371 2683198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00371 7 276 TCP Transcription Factor Family AT5G23280 60.584 4.89e-91 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pte13g00371 TCP 1.6e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00371 K16221 - qsa:O6P43_020036 324.709