Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00363 ATGGGTAGAACTGGTGCAAAGAGGCAGGCGTTGACCGGTTATGCAGCGGAAGATGATCGAGGTGGGAAGCGTAAAGACCGAAGTGTCTTCCACTCTGAAAGTTATGAGAATGACACCTTGTACGAGGACCTTTGGCAAGTGTGCGCTGGTTCTCTTGTTTACGTTCCGAGAACAGGGGACAGGGTCGTTTATTTTCCTCAGGGTCACATTGAACAGCAGGTTGAGGAATGTGCACAAAAAGATGGCCAAATGGAAGTCCCTAACTACAACTTACCTTATAAGATCCTCTGCAAAATTGTTAGTTGTCATCTGAAGGCTGAAGCTCACACAGATGAGGTATATGCTCAAGTTACTATGATTCCAGAGGCCAAGCAAGACGAGATTAATTCAAATAAGGAATATTCTCATTCATCACGAGCCAGGTCTGTGCCATGCTTCTACAGTAAGACACTTACTCCATCAGACATAAGCACTCATGGTGGATTCTCTCTTCCTAGGCGACTAGCTGATGAGTGCCTCCCTCCTCTGGATATGTCTCAGGATATACCGACACAGGAGCTTGTTGCGAAGGACTTGCATGGATTTAAATGGCATTTTCGGCACAAATATCGTGGCCAGCCAAAGAGACACTTAATTACTAGTGGTTGGAGCACGTTCTTGAATGCAAAGAAGCTGGCTGCTGGAGATTCATGCATTTTTCTAAGGTTGGGAGAAAATGGAGAGCTTCGTATAGGTGTCCGCCGAACCATGAAACAACAAAGTAATACATCAGTTTCTATCTTATCAGGCAGCTGCATGACGCATGGAATACTGGCCAATGCTTCCCATGCTATTTCTACTGGCACAATGTTCACTGTGTACTATCGTCCATGGACAAGTCCCTCTGAATTCATTGTTCCGTATGACCTATACATGAAGTCGAGAAATATCAATTGTTCAATTGGAATGCGACTTCGAATGCATGTCGAAGCAGAAGAATGTGTTAGGAAGAGACATTTAGGCACCATTGTTGGAATCGAAGACATTGATGGAGTTAAGTGGCCTGGTTCAGAGTGGAAATGCATCAAGGTGCAATGGGATGCCTCATCAGATATATTTGGGTGTCCAGAAACGGTTTCTCCTTGGTGTATTGAACCTACAGAACTTCCTAAAAGGAAATCGACTCCTTTAAATAATGCACCTCAGACATGCAACCCATTGCACTATCATGGGCATCTACCATCAAGTCAAGCAGCTCATATGCAAAATCGATCACTATTACCTGCAGTCCTCTCTCTTGCAAAGCCTGCTTTAAATGAAATCCAGGTAGCTGTGGCGAACGAAAGGCACATGTTGCTTCACAATCCCCTTCAAGAATGGTCCACCAAACCATTATCTTTCCCAAATCAGAATATATTGAATTCAGACCGTCCTGATCAGAGTCCTGCAATTTGCACTTCCAATGGTACATGTGACAGCATTGCAGTTCTCAGGAATGTTTCACTCTCAAATCAAAACTCGATTGATTCAGATTCCCAGAAATGGGAGGGTATTGAATCTAAGGGTGAAAATGAAGATCCACTTTTCCTACCTGATGGTTCCAGCAGATTCAGACTTTTTGGAGTAAACTTAGCACTTATCCATCAGGAGCTCCCTTCACCACAAATTGCCTCTTCTGGCAAAAACTCAAGTCCTCCTCCTCCTCCTCCTCCTCTTGGGCCAACATCACGGTCAAGCATAGCTGGAAATATTCAAATTTCCGAACCCTCAAAGAGCATCTCAGCAGTTGTAGTTGAGAAACAATGGAATAAATGCCACCGACTACCTAGTATTAGCTGCACAAAGGGCTTTTCCGTCACAGGTGGAAAGGATACTGTTCTGTCCAGTGGAGGAGTTCGAGAAACAGGGTCATGA 1893 0.4432 MGRTGAKRQALTGYAAEDDRGGKRKDRSVFHSESYENDTLYEDLWQVCAGSLVYVPRTGDRVVYFPQGHIEQQVEECAQKDGQMEVPNYNLPYKILCKIVSCHLKAEAHTDEVYAQVTMIPEAKQDEINSNKEYSHSSRARSVPCFYSKTLTPSDISTHGGFSLPRRLADECLPPLDMSQDIPTQELVAKDLHGFKWHFRHKYRGQPKRHLITSGWSTFLNAKKLAAGDSCIFLRLGENGELRIGVRRTMKQQSNTSVSILSGSCMTHGILANASHAISTGTMFTVYYRPWTSPSEFIVPYDLYMKSRNINCSIGMRLRMHVEAEECVRKRHLGTIVGIEDIDGVKWPGSEWKCIKVQWDASSDIFGCPETVSPWCIEPTELPKRKSTPLNNAPQTCNPLHYHGHLPSSQAAHMQNRSLLPAVLSLAKPALNEIQVAVANERHMLLHNPLQEWSTKPLSFPNQNILNSDRPDQSPAICTSNGTCDSIAVLRNVSLSNQNSIDSDSQKWEGIESKGENEDPLFLPDGSSRFRLFGVNLALIHQELPSPQIASSGKNSSPPPPPPPLGPTSRSSIAGNIQISEPSKSISAVVVEKQWNKCHRLPSISCTKGFSVTGGKDTVLSSGGVRETGS* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00363 630 MobiDBLite consensus disorder prediction 13 29 - -
Pte13g00363 630 MobiDBLite consensus disorder prediction 499 522 - -
Pte13g00363 630 Pfam B3 DNA binding domain 148 248 IPR003340 GO:0003677
Pte13g00363 630 SMART B3_2 147 250 IPR003340 GO:0003677
Pte13g00363 630 Pfam Auxin response factor 274 356 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Pte13g00363 630 MobiDBLite consensus disorder prediction 1 29 - -
Pte13g00363 630 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 38 548 IPR044835 GO:0003677|GO:0006355|GO:0009725
Pte13g00363 630 MobiDBLite consensus disorder prediction 547 573 - -
Pte13g00363 630 FunFam Auxin response factor 145 250 - -
Pte13g00363 630 MobiDBLite consensus disorder prediction 554 568 - -
Pte13g00363 630 FunFam Auxin response factor 311 383 - -
Pte13g00363 630 Gene3D - 145 250 IPR015300 -
Pte13g00363 630 SUPERFAMILY DNA-binding pseudobarrel domain 145 261 IPR015300 -
Pte13g00363 630 CDD B3_DNA 144 248 IPR003340 GO:0003677
Pte13g00363 630 Gene3D - 311 384 - -
Pte13g00363 630 ProSiteProfiles B3 DNA-binding domain profile. 147 250 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00363 Pte-Chr13 2635164 2640249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00363 40 383 B3 DNA Binding Superfamily AT5G62000 59.012 1.19e-136 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Pte13g00363 B3 2.5e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00363 - - qsa:O6P43_007108 576.244