Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00356 ATGGAACCAATCCTACGTTCCAGGTTGGATTATCGTACTTCATTGTTCTTGTTTCCTTTCAGTAACATGCATCAGATCAAACAGGTCTACAGAAACTTTAACAACCATTTCTTCGTTTCATTTCAAATTCAATCATTTACCAGACCACCATTGATTTTGAAAACAGCTAAACAAGACTCAGATTTTACTGTCTCTTACCTCATAGAATCGTGTAGGCTGGATCCTGAAACAGCTGCTCTCGCGTCCCAGAAGTTACAACTACAGTCACCAGATAGACCAGATTCTGTTCTCGCTCTGTTGAGAAACCATGGATTTACAAAAACCCAGATTTCAGATGTTGTCAGGAGGCGTCCGTTGCTTCTTTTAGCCAACCCTGGGGTTACCCTTTTGCCCAAGATCAAGTTTTTCCACTCAATTGGGGTTTCTAAACCCGTCCTCGCAAGAACCGTCGCTGTAAACCCTACCCTTTTGACAAGGAGTCTGGAGAAGCAGATAATTCCTACGTATAACTTTTTCAAGAGCTTGTTGCATACAGACGAAAAAGTTATCGCTGCTTTAAAGCGGTCCTCTTGGATTTTCCTTGTTGACCATAGAAAGAATCTCATACCCAATGTAGCAGTTCTGAGAGAAGCGGGTGTTCCTGATACTCGCACTGCTTTGTTGTTAACTCATTTTCCGGAGGCATTGATGCAAAGGAAGGAGGAATTTAGTAAAATCGTATCAGAGGTGAAGGAAATGGGATTTTGTCCTACGAAGTCTACATTTGTATTAGCAATTCATGCTCTATCTGGTGAAGGAAATAGATTAATACATAACCGGTGTGTTGAGGTTTATCGGAGATGGGGTTGGTCTGAGGACGACATTCTTTATGCGTTTAAGAGGCACCCCCAATCTATGCTGTTGTCAGAGGATAAGATAACGAATGCAATGGATTTTTTGGTGAACAAGATGGGATGGCCATCCGGAATGATAATCAGATGTCCAGTTGTCTTGTTTTTCAGCTTCCAGAAGAGAATTAAACCAAGATGTTCTGTTGTCAAGGTTTTACTTCAGGAAGGTTTAGTAAAGAACTTGAGCTTATCTACTTTCTTGTTTCCGGATGAGGAACAGTTTGTGGATAGTGTGCTTGGAATTGAAGAATATCTGATGTGCAATATAACTTACCATGGGAGTTCCTTAAGAGTTAAGAGGCATAGCTGCCAGTAA 1206 0.4113 MEPILRSRLDYRTSLFLFPFSNMHQIKQVYRNFNNHFFVSFQIQSFTRPPLILKTAKQDSDFTVSYLIESCRLDPETAALASQKLQLQSPDRPDSVLALLRNHGFTKTQISDVVRRRPLLLLANPGVTLLPKIKFFHSIGVSKPVLARTVAVNPTLLTRSLEKQIIPTYNFFKSLLHTDEKVIAALKRSSWIFLVDHRKNLIPNVAVLREAGVPDTRTALLLTHFPEALMQRKEEFSKIVSEVKEMGFCPTKSTFVLAIHALSGEGNRLIHNRCVEVYRRWGWSEDDILYAFKRHPQSMLLSEDKITNAMDFLVNKMGWPSGMIIRCPVVLFFSFQKRIKPRCSVVKVLLQEGLVKNLSLSTFLFPDEEQFVDSVLGIEEYLMCNITYHGSSLRVKRHSCQ* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00356 401 Gene3D Transcription termination factor 3, mitochondrial 159 382 IPR038538 -
Pte13g00356 401 FunFam Mitochondrial transcription termination factor-like 161 377 - -
Pte13g00356 401 Pfam mTERF 97 249 IPR003690 GO:0003690|GO:0006355
Pte13g00356 401 Pfam mTERF 273 371 IPR003690 GO:0003690|GO:0006355
Pte13g00356 401 PANTHER CGI-12 PROTEIN-RELATED 61 374 IPR003690 GO:0003690|GO:0006355
Pte13g00356 401 SMART mt_12 289 320 IPR003690 GO:0003690|GO:0006355
Pte13g00356 401 SMART mt_12 183 214 IPR003690 GO:0003690|GO:0006355
Pte13g00356 401 SMART mt_12 219 249 IPR003690 GO:0003690|GO:0006355
Pte13g00356 401 SMART mt_12 321 355 IPR003690 GO:0003690|GO:0006355
Pte13g00356 401 SMART mt_12 111 142 IPR003690 GO:0003690|GO:0006355
Pte13g00356 401 SMART mt_12 147 178 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00356 Pte-Chr13 2557537 2559633 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pte13g00356 mTERF 1.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00356 K15031 - qsu:112019279 418.313