Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00355 ATGGAACCAATCCTACGTTCCAGGTTGGATTATCGTATTTCATTGTTCATGTTTCCTTTCAGTAACATGCATCAGATCAAACAGGTCTACAGAAACTTTAACAACCATTTCTTCTTTTCATTTCAAATTCAATCATTTACCAGACCACCATTGATTTTGAAAACAGCTAAACAATACTCAGATTTTACTGTCTCTTACCTGATAGAATCATGTAGGCTGGATCCGGAAACAGCTGCTCTCGCGTCCCAGAAGTTACAACTACAGTCACCAGATAGACCAGATTCTGTTCTCGCTCTGTTGAGAAACCATGGATTTACAAAATCCCAGATTTCAGATGTTGTCAGGAGGCGTCCGTTGCTTCTTTTAGCCAACCCTGGGGTTACCCTTTTGCCGAAGCTCATGTTTTTCCACTCAGTTGGGGTTTCTAAACCCGTCCTCGCAAGAACCGTCGCTCTAAACCCTACCCTTTTGACAAGGAGTCTGGAGAAGCAGATAATTCCTACGTATAACTTTTTCAAGAGCTTGTTGCATACAGACGAAAAAGTTATCGCTTCTTTAAAGCGGTCCTCTCGGATTTTCCTTGTTGACCATAGAAAGATTTTCATACCCAATGTAGCAGTTCTGAGAGAAGCGGGTGTTCCTGATACTCGCACTGCTTTTTTGTTAACTCATTTTCCGGAGGCATTGATGCGAAGGAAGGAGGAATTTAGTAAAATCGTATCAGAGGTGAAGGAAATGGGATTTTGTCCTACGAAGTCTACATTTGTATTAGCAATTCATGCTCTATCTGGTGAAGGAAATAGATTAATACATAACCGGTGTGTTGAGGTTTATCGGAGATGGGGTTGGTCTGAGGACGACATTCTTTATGCGTTTAAGAGGCACCCCCATTCTATGCTGTTGTCAGAGGATAAGATAACGAATGCAATGGATTTTTTGGTGAACAAGATGGGATGGCCATCCGGAATGATAATCAGATGTCCAGTTGTCTTGTTTTTCAGCTTCCAGAAGAGAATTAAACCAAGATGTTCTGTTGTCAAGGTTTTACTTCAGGAAGGTTTAGTAAAGAACTTGAGCTTATCTACTTTCTTGTTTCCGGATGAGGAACAGTTTGTGGATAGTGTGCAATTGAAGAATATCTGA 1143 0.4094 MEPILRSRLDYRISLFMFPFSNMHQIKQVYRNFNNHFFFSFQIQSFTRPPLILKTAKQYSDFTVSYLIESCRLDPETAALASQKLQLQSPDRPDSVLALLRNHGFTKSQISDVVRRRPLLLLANPGVTLLPKLMFFHSVGVSKPVLARTVALNPTLLTRSLEKQIIPTYNFFKSLLHTDEKVIASLKRSSRIFLVDHRKIFIPNVAVLREAGVPDTRTAFLLTHFPEALMRRKEEFSKIVSEVKEMGFCPTKSTFVLAIHALSGEGNRLIHNRCVEVYRRWGWSEDDILYAFKRHPHSMLLSEDKITNAMDFLVNKMGWPSGMIIRCPVVLFFSFQKRIKPRCSVVKVLLQEGLVKNLSLSTFLFPDEEQFVDSVQLKNI* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00355 380 FunFam Mitochondrial transcription termination factor-like 161 375 - -
Pte13g00355 380 SMART mt_12 219 249 IPR003690 GO:0003690|GO:0006355
Pte13g00355 380 SMART mt_12 321 355 IPR003690 GO:0003690|GO:0006355
Pte13g00355 380 SMART mt_12 183 214 IPR003690 GO:0003690|GO:0006355
Pte13g00355 380 SMART mt_12 147 178 IPR003690 GO:0003690|GO:0006355
Pte13g00355 380 SMART mt_12 289 320 IPR003690 GO:0003690|GO:0006355
Pte13g00355 380 SMART mt_12 111 142 IPR003690 GO:0003690|GO:0006355
Pte13g00355 380 Pfam mTERF 97 249 IPR003690 GO:0003690|GO:0006355
Pte13g00355 380 Pfam mTERF 273 371 IPR003690 GO:0003690|GO:0006355
Pte13g00355 380 PANTHER CGI-12 PROTEIN-RELATED 62 373 IPR003690 GO:0003690|GO:0006355
Pte13g00355 380 Gene3D Transcription termination factor 3, mitochondrial 160 378 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00355 Pte-Chr13 2554695 2556567 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pte13g00355 mTERF 3.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00355 K15031 - csin:114321650 404.06