Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00335 ATGGTTGAAACTAGAAGAAGCTCCTCCTCATCCAAGCGAACCCTATCGTCTTCTCAACCTTCAAGCGTTAAACGATCTAAGGTATCTGAGGCTACCTCATCAACTAGTCTGCCACCGGTTGAAATGGGCGGCCCAATCAAAGAATCTGGCTCTGATTCTCGAGAACCAGAGCTACAGCAATCTGATCTGCCAGATGCCGATTCTATGAAGGATGCAGATGTCTGTGATGCAATTTTGCCTGAAAAGTCTACAGTTATGCCTGTTGAAGGGGAGGCCTTGATCTCGCCGCTAAACATAGGCGAGGCTGCAGTAGATGCGGACCAGTCGAAGTTGGTTGGCCAGACGACGTTGCCTCGGATTAAAAAATGCTCTGCCAAAGCAACAAAGCCTAACCACCCCAAAGTTGCTTGGGGAAAGCTTATTTCTCAGTGTTCTCAGAATCCTCATTTGACTATGAGTGGACATCACTTCACTGTTGGCCAAGGTCGTCAATGTAATTTGTGGCTGAAAGACCCATCGATCAGCAAGGTTTTGTGCAAACTGAGGAACATAGAGTATGGAGCTTCATCTGGTGCACTACTAGAAATAACAGGTGGGAAAGGAGGTGTTCTGGTTAACGGCAAGATCCATCATAAAAGTTCTCATGTTATTCTAAATAGTGGTGATGAGGTGATCTTCGATTATTCTGGAAGGCATGCATATATTTTTCAGCAGCTTAGTACCAATGACGTCTCTGCTACTTGCATACCATCTGTAAGTATTCTTGAAGTTCAGAGTGCTCTGACAAAGGCAATGCATATTGATGCAAGATCCAGGGATTCCTCAGCAGTTGCTGGAACTTCAATATTAGCATCATTGTCCAGTCATCATAAAGATTTATCTCTACCTCTGCCACATGCTAAAGCTGGTGAAGCTGTTGAACAGAATACTGAGATTTCAACACCTTCCTCTGGCTGTCAGGATGACTCTCCGGATATCGAAATGAAGGATACCACAATCAGCAATAATTGTGCTGAGGAAGTTGGATCACCAGAAAAAAATGCCATTCCATCCTCTGTTGCTGTCAATGGAAACCCTACAGTTGACTGCAATGATCCCAACGCTTGTGTGGATGCTGAACTGGGAAAGCTTAGTGGGGCAAAACAAGAATACAGACCGCTGCTGCGGATGCTTAAACACTCTCCAGATGTTGATTTATGTAGCAGCATTTACAAGATGTTTGATGAGAAAAGGGAAGGCAAAGATCTTCTTAAGGATGCCGAACCCTCTAATACAATGGCATCAACCCGACGACAAGCATTCAAAGATAGTTTACAGAAAAGGATTCTCAGTCCTGATTATAATGACGTTTCATTTGAAAGTTTCCCATACTACCTGAGTGAGACAACCAAGAGTGTCCTTATTGGTTCGACATTCATACACTTAAAGTGCAATGCATTCGCAAAATTAGCTTCTGATCTTCCTACTGTGTGCCCAAGGATACTGTTATCTGGTCCTGCAGGTTCAGAGATATATCAGGAAACTTTGGCAAAGGCCCTTGCAAAGCATTTTGGAGTGAGACTGCTGATTGTAGATTCACTTCTGTTGCCTGGGGGAATGCCACCTAAAGATAATGATTCTTCCAAAGATATTTCAAGACCTGAGAGAGCATCTGTATTTGCAAAGCGAACATCCCATACTGTTGCTTTACATCACAAGAAACCAGCCTCTAGTGTAGAGGCTGATATTATTGGTGGGTCAACCTTAAGCTCTCAAGGATTGCCGAAACAGGAGACATCTACGGCATCATCTAAAGGCACAGCCTTAAAGAAAGGTGATCGAGTAAAATTTGTGGGTACGGCACCTTCTACTATCTCATCACTACAGAATGGGCCTTCAAGGGGCCCAAGTTATGGCTGTCGGGGGAAAGTTCTCCTTGCTTTTGAAGATAATGGATCTTCTAAAATTGGTGTTAGATTTGATAAATCAATTCCTGATGGTAATGATCTTGGTGGCCTATGTGAAGATGATCATGGTTTTTTTTGCTCTGCAAATCATTTACTGCGGTTAGATGGTGCCAGTGGGGATGACATTGACAGGCTTGCAATTAATGAACTCTTTGAGGTCGCAGCAAATGAAAGCAAAGCAAATGCTTTGATATTGTTCTTGAAGGATATGGAGAAGAGTATGGCGGGCAACTCAGACGTGTATACAAGTTTAAAGAGTAAACTTGAGAATTTACCCCAGAACGTCGTTGTAATTGGGTCACATACTCAGCTGGACAACCGTAAAGAGAAGTCTCATCCTGGTGGTCTTCTGTTTACGAAGTTTGGAAGTAGTCAGACTGCACTACTTGACCTTGCTTTTCCGGACAACTTTGGTAGGCTGCATGACCGGAACAAAGAAACCCCCAAGACAATGAAGCAACTCACTCGGCTTTTTCCTAACAAAGTTACAATCCAGATCCCTCAGGATGAGGCTTTACTTTCTGACTGGAAGCTGCAATTGGAACGTGACATTGAGACCATGAAAGCACAGTCAAACATAGTGAGCATTCGTGCAGTTCTGAACAGAATAGGATTGGATTGCCCAGACCTTGATACACTGTGCATTAAGGATCAATCGCTAACCACTGAAAATGTTGAGAAAATCATTGGATGGGCTTTAAGTTATAATTTTATGCACTTCTCGGATGCTGTTGTGAAAGATTCTGGACTTGTGATTTCAACTGAGAGTATTATACATGGTTTAAACATTTTTCAAGGCATTCAAAATGAGAGCAAGAGCCTGAAGAAATCATTGAAGGATGTGGTCACAGAAAATGAGTTTGAGAAAAAACTTCTTGCTGACGTAATTCCCCCAACTGACATTGGTGTCTCATTTGATGATATCGGTGCCCTTGAAAATGTGAAGGACACCTTAAAGGATTTGGTGATGCTTCCACTTCAGAGGCCTGAATTGTTTTGCAAAGGACAATTGACTAAGCCTTGCAAGGGAATATTACTCTTTGGTCCTCCTGGCACTGGAAAGACAATGCTTGCAAAGGCTGTGGCAACTGAGGCTGGTGCGAATTTTATCAATATATCAATGTCAAGCATTACATCAAAGTGGTTTGGGGAAGGTGAAAAATATGTAAAAGCTGTATTCTCTCTCGCAAGCAAAATTGCTCCAAGTGTTGTTTTTGTTGATGAGGTTGATAGCATGTTAGGAAGACGAGAAAACCCCGGTGAGCATGAGGCGATGCGTAAAATGAAAAATGAGTTCATGATGAATTGGGATGGTCTGCGCACTAAGGATAAAGAGCGTGTGCTTGTTCTTGCTGCAACAAACAGGCCTTTTGACCTTGATGAGGCTGTTATTCGGAGGCTTCCTCGGAGGTTGATGGTTAATTTACCTGATACTTCAAACCGGGAAAAGATCCTGACAGTCATTTTAGCCAAAGAAGAGTTGGGTCCTGATGTCAATATGGAAGCTCTTGCAAATATGACTGACGGGTACTCTGGAAGCGACCTAAAGAATTTTTGTGTATCGGCAGCATATTGTCCTATTAGAGAGATTTTGGAGAAGGAAAAAAAGGAAAAAACTTTAGCTGCTTCCGAGAATAGACCTTTACCTTCATTATGCAGCAGTGCAGATGTCCGTGCTTTGAAAATGCAGGATTTTAAGTATGCACATGAGCAGGTTTGTGCGAGCGTTTCAGCAGACTCTTCTAATATGAATGAGCTGCTGCAATGGAATGATCTATATGGAGAAGGTGGATCGAGGAAGAAGAGTTCTTTAAGTTATTTCATGTAG 3774 0.4263 MVETRRSSSSSKRTLSSSQPSSVKRSKVSEATSSTSLPPVEMGGPIKESGSDSREPELQQSDLPDADSMKDADVCDAILPEKSTVMPVEGEALISPLNIGEAAVDADQSKLVGQTTLPRIKKCSAKATKPNHPKVAWGKLISQCSQNPHLTMSGHHFTVGQGRQCNLWLKDPSISKVLCKLRNIEYGASSGALLEITGGKGGVLVNGKIHHKSSHVILNSGDEVIFDYSGRHAYIFQQLSTNDVSATCIPSVSILEVQSALTKAMHIDARSRDSSAVAGTSILASLSSHHKDLSLPLPHAKAGEAVEQNTEISTPSSGCQDDSPDIEMKDTTISNNCAEEVGSPEKNAIPSSVAVNGNPTVDCNDPNACVDAELGKLSGAKQEYRPLLRMLKHSPDVDLCSSIYKMFDEKREGKDLLKDAEPSNTMASTRRQAFKDSLQKRILSPDYNDVSFESFPYYLSETTKSVLIGSTFIHLKCNAFAKLASDLPTVCPRILLSGPAGSEIYQETLAKALAKHFGVRLLIVDSLLLPGGMPPKDNDSSKDISRPERASVFAKRTSHTVALHHKKPASSVEADIIGGSTLSSQGLPKQETSTASSKGTALKKGDRVKFVGTAPSTISSLQNGPSRGPSYGCRGKVLLAFEDNGSSKIGVRFDKSIPDGNDLGGLCEDDHGFFCSANHLLRLDGASGDDIDRLAINELFEVAANESKANALILFLKDMEKSMAGNSDVYTSLKSKLENLPQNVVVIGSHTQLDNRKEKSHPGGLLFTKFGSSQTALLDLAFPDNFGRLHDRNKETPKTMKQLTRLFPNKVTIQIPQDEALLSDWKLQLERDIETMKAQSNIVSIRAVLNRIGLDCPDLDTLCIKDQSLTTENVEKIIGWALSYNFMHFSDAVVKDSGLVISTESIIHGLNIFQGIQNESKSLKKSLKDVVTENEFEKKLLADVIPPTDIGVSFDDIGALENVKDTLKDLVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMMNWDGLRTKDKERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDTSNREKILTVILAKEELGPDVNMEALANMTDGYSGSDLKNFCVSAAYCPIREILEKEKKEKTLAASENRPLPSLCSSADVRALKMQDFKYAHEQVCASVSADSSNMNELLQWNDLYGEGGSRKKSSLSYFM* 1258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00335 1257 MobiDBLite consensus disorder prediction 307 321 - -
Pte13g00335 1257 Gene3D - 1125 1219 - -
Pte13g00335 1257 ProSitePatterns AAA-protein family signature. 1096 1115 IPR003960 GO:0005524|GO:0016887
Pte13g00335 1257 Gene3D - 136 247 - -
Pte13g00335 1257 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 952 1231 IPR027417 -
Pte13g00335 1257 MobiDBLite consensus disorder prediction 303 329 - -
Pte13g00335 1257 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 951 1127 - -
Pte13g00335 1257 Pfam FHA domain 158 226 IPR000253 GO:0005515
Pte13g00335 1257 MobiDBLite consensus disorder prediction 1 39 - -
Pte13g00335 1257 ProSiteProfiles Forkhead-associated (FHA) domain profile. 157 210 IPR000253 GO:0005515
Pte13g00335 1257 Gene3D - 951 1230 IPR027417 -
Pte13g00335 1257 SMART AAA_5 989 1126 IPR003593 GO:0016887
Pte13g00335 1257 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 432 1256 - -
Pte13g00335 1257 SUPERFAMILY SMAD/FHA domain 137 234 IPR008984 GO:0005515
Pte13g00335 1257 CDD RecA-like_ATAD1 956 1122 - -
Pte13g00335 1257 MobiDBLite consensus disorder prediction 48 70 - -
Pte13g00335 1257 MobiDBLite consensus disorder prediction 1 70 - -
Pte13g00335 1257 Pfam ATPase family associated with various cellular activities (AAA) 993 1122 IPR003959 GO:0005524|GO:0016887
Pte13g00335 1257 Pfam AAA+ lid domain 1146 1182 IPR041569 -
Pte13g00335 1257 MobiDBLite consensus disorder prediction 580 600 - -
Pte13g00335 1257 CDD FHA 139 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00335 Pte-Chr13 2396343 2405734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00335 949 1193 Calmodulin-binding Proteins AT3G56690 33.735 2.26e-32 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00335 - - qsa:O6P43_007158 1834.69