Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00308 ATGAAGAACATAGCAGTTTCCTTCTTCCTTTTCATCTCCTGCCTCGTCTTTGCAACCAATCAACTAGAAGCCAGAACCGTTGAATTGGTTCATTCTCACAACGACAATGATGTCAATTTAACACGAGAATCTCAGGCAACGATATTCCCAGTTGCAGCAGTTGAGAAAGTTTGTCGGTTCGCCAAGGACGACAAACTGTGTATCGAGAGCCTTCAAAAAGATCCAGATCTCGTCCATGCTGATGCAAAGAGCTTGGCATTCGAATCCATTAAAGTGGCCTTGTCAAATGCCACAGACATAAGTAAGCACGTGAAGTTTTTGGTGACCAACACGAAATTTAGTCCTGAAATTCAGCAGGGCATGAGTGATTGCCAGCAAGAATTCATTGACGTTGATGACCAACTGGATGACTGCCTCGAGGCTTTAATGGCTGGTGACACCAAAAATGTGGAAGAATGGCTCAAAGCTGCAATGGCTGCGGCTGACACCTGCATGGATTCCCTGAAGGGAGTTGAGACTATTCTTTTGCAGAAGACTCAAACCTTCCACTTATTGTGTGAGAATGCATTGGCCATTACCAAGGCCTTCTCCTCAGACCCCTCGAGCCTCTTGGCCTAA 618 0.4563 MKNIAVSFFLFISCLVFATNQLEARTVELVHSHNDNDVNLTRESQATIFPVAAVEKVCRFAKDDKLCIESLQKDPDLVHADAKSLAFESIKVALSNATDISKHVKFLVTNTKFSPEIQQGMSDCQQEFIDVDDQLDDCLEALMAGDTKNVEEWLKAAMAAADTCMDSLKGVETILLQKTQTFHLLCENALAITKAFSSDPSSLLA* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00308 205 Pfam Plant invertase/pectin methylesterase inhibitor 53 192 IPR006501 GO:0004857
Pte13g00308 205 PANTHER PECTINESTERASE INHIBITOR-LIKE 5 197 - -
Pte13g00308 205 NCBIfam pectinesterase inhibitor domain 51 194 IPR006501 GO:0004857
Pte13g00308 205 Gene3D Invertase/pectin methylesterase inhibitor family protein 52 196 IPR035513 -
Pte13g00308 205 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 195 IPR035513 -
Pte13g00308 205 SMART PMEI_2 49 192 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00308 Pte-Chr13 2215478 2216659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00308 43 172 Carbohydrate Esterase AT5G53370 26.119 8.36e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00308 - - qsa:O6P43_007194 145.206