Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00307 ATGTTAGTCAACCTGAGCTTTGGGCCCCTCCTTTATAAATTTAGGGCTGAAACCTGTGATATGCTAATTCGAAACATGGCGATGGCTTCCATACCCGTCTCCATTGTCCTGGCATTTGCATGCATCCCTTTCGTTCCTTCGTTTGTGTCACCATCACTTGCAGACAACACTCCACTGGTGCCACCAGGAACCGTCTGCGCTTTCACCAGAGACCCTTCTTATTGCAGAACCACGCTCCCCGACAAGAATTTAACAATCTATGACTTTGGTCGCTTTGCAGTTTACAAATCCTTGTCACAATCCCGCAGGTTTTTGAGCTTGGTGAACTCCTACCTTGAGAGTCGTAACATGTCTGGAACAGTCATTCGAGCTCTCGAAGATTGTCGCTTTCTTGGTGAAGACAATTTGGATTTGTTTTCAAGCTCATATTCCGCTTTAAGAACTGCTAACTCTTCCGTCCCCAGTTCCCTGTCTGATGATGTTCAAACATGGCTTAGTGCAGTTTTGACAAATCAGGACACCTGTTTTGGTGGTCTCTTTACTGCACCATCAAAATCCGCATCAGACTCGACAGTAAAGACCGAAGTTTGCACATCAGTCTCAGATGACATTAAGCTCCACAGTCTGTCTCTGGCTCTGTTTGTCTCTGTTTGGGCACCCCCTAAGAAAATTGCGACAACTTGGCAACCAAATAAATTGAATCTAGATTTCCGAAATGGTCGATTGCCATTGAAAATGTTTGATAGAGTGCGTGCAATTTTTGATGCAGCAAGGGGACATCATGTTGCAGGACTAGGAAGGAGAAAATTGCTACAAAGTTCAAGTAATGAGGGCGGAAATGCAAGCGTTGCGATTAACGATATTGTTGTTGTGAGTCAAGATGGAAGCGGAAACTTCACCAACATCAATGACGCTATTTCAGCCGCGCCCAACAACAGTGCCCAGACCAATGGTTACTTTTTGGTATGCATCAAAGCGGGTGTGTATGAGGAGTATGTTTTCATTGCCAGCAACAAGCGTTACTTGATGTTACTCGGTGATGGAATCAATCAAACGATCATCACCGGCAACCACAGTGTCGGCGATGGTTGGACAACCTTCAGTTCTGCAACCTTTGCTGTGGTGGCCGAAGGCTTTGTAGCTGCCAACATAACTTTCCGCAATACTGCTGGACCAAGCAAGTGGCAAGCAGTAGCCGTGAGAAATGGGGCAGACCTATCAGCTTTCTACAGCTGCAGAATGGAAGGGTACCAAGATACTTTATACTCTCATTCTAAAAGGCAATTTTACAGAGAATGTGACATCTTTGGAACTGTGGACTTCATATTTGGCAATTCTGCAGTTGTTCTCCAAAATTGTAACATATATCCGCGCCTACCACTGTCTGGGCAGTTCAATCCCATCAGTGCTCAAGGAAGAACGGACCCTAATCAGAATACGGGTATTTCCGTTCAGAACTGCACCCTAACCCCCTCCTTTGAATTAGCTCCATATGTTAGCACAGTGAAAACGTATATGGGGAGGCCATGGAAGGAGTATTCAAGGACAGTGTATATGCAGTCTTTCATGGATAGCTTCTTAGATCCAGCTGGTTGGGCTGAATGGAATGGGACCTTTGCACTTAGCACACTGTACTATGCTGAGTACAACAATACTGGCCCAGGATCAAACACCACCAACAGAGTGACATGGCCTGGTTACCATGTGATCAATGCCACCGATGCTGCTAATTTCACCGTCTCAAATTTTTTGCAGGGCGATAACTGGTTGCCCCGAACTGGAGTTCCATACACCGCTGGACTCATATCGTACTAA 1815 0.4562 MLVNLSFGPLLYKFRAETCDMLIRNMAMASIPVSIVLAFACIPFVPSFVSPSLADNTPLVPPGTVCAFTRDPSYCRTTLPDKNLTIYDFGRFAVYKSLSQSRRFLSLVNSYLESRNMSGTVIRALEDCRFLGEDNLDLFSSSYSALRTANSSVPSSLSDDVQTWLSAVLTNQDTCFGGLFTAPSKSASDSTVKTEVCTSVSDDIKLHSLSLALFVSVWAPPKKIATTWQPNKLNLDFRNGRLPLKMFDRVRAIFDAARGHHVAGLGRRKLLQSSSNEGGNASVAINDIVVVSQDGSGNFTNINDAISAAPNNSAQTNGYFLVCIKAGVYEEYVFIASNKRYLMLLGDGINQTIITGNHSVGDGWTTFSSATFAVVAEGFVAANITFRNTAGPSKWQAVAVRNGADLSAFYSCRMEGYQDTLYSHSKRQFYRECDIFGTVDFIFGNSAVVLQNCNIYPRLPLSGQFNPISAQGRTDPNQNTGISVQNCTLTPSFELAPYVSTVKTYMGRPWKEYSRTVYMQSFMDSFLDPAGWAEWNGTFALSTLYYAEYNNTGPGSNTTNRVTWPGYHVINATDAANFTVSNFLQGDNWLPRTGVPYTAGLISY* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00307 604 SMART PMEI_2 57 213 IPR006501 GO:0004857
Pte13g00307 604 Gene3D - 286 603 IPR012334 -
Pte13g00307 604 ProSitePatterns Pectinesterase signature 2. 435 444 IPR033131 -
Pte13g00307 604 Pfam Pectinesterase 289 587 IPR000070 GO:0030599|GO:0042545
Pte13g00307 604 Gene3D Invertase/pectin methylesterase inhibitor family protein 63 217 IPR035513 -
Pte13g00307 604 PANTHER PECTINESTERASE 42 591 - -
Pte13g00307 604 FunFam Pectinesterase 282 601 - -
Pte13g00307 604 SUPERFAMILY Pectin lyase-like 283 600 IPR011050 -
Pte13g00307 604 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 64 214 IPR035513 -
Pte13g00307 604 CDD PMEI-like_3 64 214 - -
Pte13g00307 604 Pfam Plant invertase/pectin methylesterase inhibitor 64 211 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00307 Pte-Chr13 2212508 2215460 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00307 48 603 Carbohydrate Esterase AT1G02810 56.131 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00307 K01051 - gmx:100813051 748.043