Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00290 ATGATTTGTGTGGATAATTTCAGGTGGTCTTTGATAGCAAGTCATTTGCCAGGGAGAACGGACAACGAGATAAAGAACTACTGGAATTCTCACTTGAGTAGGAAGATTGACACCTTCAGGCCAAGGCCAGCGCCAAGGCCAATCTCTTTTACTCAGGTAACTACGCCAATGAACATGAACGACATTTCCAAAGTGAACACGCCACCAAAAGCAAAAGCAAATAGAGCCAGCCGTTGGTCTACGAAGAAGAACAAATATCCAGCTTCTGAAACGTATGTTTCATCATATGGGGTTGAAAAAAATAATACCAGTGGAGATGAAGCAGCAATCCTATTGCCGCAAACCCCTGAAGTGGAGACTGAAAGCTTGCCTAGTTTGATGATAAAAAATAGCCTGATCTTGGACATAGAATCTGCTGAAGGGACTTCCAACGATCTAATGACGAATTCTAGTGATAATGATCAAGAACTTGAATTGGACGAGACCCTTTTGCACTATAGTGAAGGAGTAGTAGTAGAGAGTTTGAGAGGAATAAGTCCTAAAGATGTTCTGGAAGAGAAATGGGATGATACGATTTTGTCCCCTGATGGAAAAGAAATTATGACTAGTACTGTTCCAGGACCCTACGGTGAGAAGAGCATTAAACTGGACAGAGGCGAGACATTATGTTTTGATGACATACTGGTTTGTAATGTACAGGATTTAGGTGATGTATTAAATGAAACACAAGATGTCGTCATGGCCATGGGTCTTGGTGATCAAAGTGAGGCTACTTGTCCAAAGGAAATGGACATGGAGAATGCAAAGCTCCGCTCAAACGGGGAGGTGAGCACAGACTGGTTTCCTAGCTCTCCCGTCTCTTTGGCTTTCGGCGATGATAATATCGAAAACAACGACCGGAACTGGGATGATCAATCATGGGATGAACAGAACTGCATGTGGTCATGGTTGTGGGAGGGAGAAAATGTCGAGAGTGACTCTCGTGAAATACAAAGCTTGGATCCTGCAAGAGAGAATGCAATGGTTGCATGGCTTCTTTCTTGA 1044 0.432 MICVDNFRWSLIASHLPGRTDNEIKNYWNSHLSRKIDTFRPRPAPRPISFTQVTTPMNMNDISKVNTPPKAKANRASRWSTKKNKYPASETYVSSYGVEKNNTSGDEAAILLPQTPEVETESLPSLMIKNSLILDIESAEGTSNDLMTNSSDNDQELELDETLLHYSEGVVVESLRGISPKDVLEEKWDDTILSPDGKEIMTSTVPGPYGEKSIKLDRGETLCFDDILVCNVQDLGDVLNETQDVVMAMGLGDQSEATCPKEMDMENAKLRSNGEVSTDWFPSSPVSLAFGDDNIENNDRNWDDQSWDEQNCMWSWLWEGENVESDSREIQSLDPARENAMVAWLLS* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00290 347 CDD SANT 8 32 IPR001005 -
Pte13g00290 347 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 8 129 - -
Pte13g00290 347 Gene3D - 4 51 - -
Pte13g00290 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 36 IPR017930 -
Pte13g00290 347 ProSiteProfiles Myb-like domain profile. 8 32 IPR001005 -
Pte13g00290 347 Pfam Myb-like DNA-binding domain 8 32 IPR001005 -
Pte13g00290 347 SUPERFAMILY Homeodomain-like 7 36 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00290 Pte-Chr13 2079426 2080673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00290 8 82 MYB Transcription Factor Family AT2G47460 53.247 6.13e-16 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte13g00290 Myb_DNA-binding 1.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00290 K09422 - zju:107426233 155.992