Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00289 ATGGCGCATCCAAGACCAAAGCTGTTTGTTTCTCTGTGTTTCACTCTGAGCTTTGCTCTCACTGCCACTGAAGGGAAGGGCTACTACGATATACTGCAAGTGCCTAAGAGTGCGTCCGATGAGAAAATAAAAAGGTCATACAGGAAGCTGGCTTTGAAGTATCATCCCGATAAGAATCAAGGCAATGAAGAAGCTAATAGGAGATTTGCTGAGATCAATAATGCATATGAGGTGTTGTCGGACGGAGAGAAGAGGAATATATATGACAGGTATGGCGAAGAGGGTTTGAAACAGCATGCTGCTAGTGGAGGCGGTGGCGGTGGGATGGGAATGAACATCCAAGACATATTCAGCACGGAATCACGAGGCCCAAAGAAGTTAGATAGTTCAAAGGCGAAGGAATGCCTCTGCATATGA 417 0.458 MAHPRPKLFVSLCFTLSFALTATEGKGYYDILQVPKSASDEKIKRSYRKLALKYHPDKNQGNEEANRRFAEINNAYEVLSDGEKRNIYDRYGEEGLKQHAASGGGGGGMGMNIQDIFSTESRGPKKLDSSKAKECLCI* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00289 138 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 26 120 IPR044713 GO:0006457|GO:0030544
Pte13g00289 138 Gene3D DnaJ domain 25 132 IPR036869 -
Pte13g00289 138 SMART dnaj_3 26 84 IPR001623 -
Pte13g00289 138 SUPERFAMILY Chaperone J-domain 23 114 IPR036869 -
Pte13g00289 138 Pfam DnaJ domain 28 89 IPR001623 -
Pte13g00289 138 FunFam DnaJ protein ERDJ3B 24 125 - -
Pte13g00289 138 ProSitePatterns Nt-dnaJ domain signature. 69 88 IPR018253 -
Pte13g00289 138 PRINTS DnaJ domain signature 47 62 IPR001623 -
Pte13g00289 138 PRINTS DnaJ domain signature 29 47 IPR001623 -
Pte13g00289 138 PRINTS DnaJ domain signature 84 103 IPR001623 -
Pte13g00289 138 PRINTS DnaJ domain signature 64 84 IPR001623 -
Pte13g00289 138 ProSiteProfiles dnaJ domain profile. 27 92 IPR001623 -
Pte13g00289 138 CDD DnaJ 28 81 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00289 Pte-Chr13 2070953 2072513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00289 23 91 C2H2 Transcription Factor Family AT1G74250 40.541 1.14e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00289 K09517 - pvy:116132441 189.889