Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00279 ATGTATTCGATTCAAGGGCAAGCAAGTTCAGGCTCCGAAGGGGATCAGAGATCTGGTCTGATCGATGACAGGAAGAGAAAGAGGATGCAGTCAAATCGCGAATCAGCGCGCAGATCGAGGATGAGAAAGCAGAAACAACTGGAGGATATGACCCATGAAGTTGGGAGGTTGCAGATCGTCAATAGTCAACTGGTTGAGAACATAAAGACGAAAGAGGAACAGTACGTGAAGATGGTTTCTGCTACTAATGTTTTGAGGGCACAAGCTATGGAGTTAGCCGATCGACTGCGTTTCTTGAACTCGATACTTGAGATAGCCCAAGATGTCAGTGGATTTTCCGTTGATATTCCTCAGATACCAGATACCCTTCTCGAGCCTTGGCAAGTCCCTCATCCAACTCAGTCGATTATGGCATCTGCAGATGGGATTCTAATGTGA 438 0.4635 MYSIQGQASSGSEGDQRSGLIDDRKRKRMQSNRESARRSRMRKQKQLEDMTHEVGRLQIVNSQLVENIKTKEEQYVKMVSATNVLRAQAMELADRLRFLNSILEIAQDVSGFSVDIPQIPDTLLEPWQVPHPTQSIMASADGILM* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00279 145 SUPERFAMILY Leucine zipper domain 24 79 IPR046347 GO:0003700|GO:0006355
Pte13g00279 145 SMART brlzneu 20 84 IPR004827 GO:0003700|GO:0006355
Pte13g00279 145 Pfam bZIP transcription factor 24 80 IPR004827 GO:0003700|GO:0006355
Pte13g00279 145 Coils Coil 33 53 - -
Pte13g00279 145 CDD bZIP_plant_GBF1 25 75 IPR045314 GO:0003700|GO:0006355
Pte13g00279 145 MobiDBLite consensus disorder prediction 17 50 - -
Pte13g00279 145 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 27 42 IPR004827 GO:0003700|GO:0006355
Pte13g00279 145 Gene3D - 23 78 - -
Pte13g00279 145 PANTHER BZIP TRANSCRIPTION FACTOR 44 7 141 - -
Pte13g00279 145 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 22 85 IPR004827 GO:0003700|GO:0006355
Pte13g00279 145 FunFam BZIP transcription factor 22 73 - -
Pte13g00279 145 MobiDBLite consensus disorder prediction 1 16 - -
Pte13g00279 145 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00279 Pte-Chr13 1968541 1970492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00279 1 141 bZIP Transcription Factor Family AT3G62420 54.225 1.69e-48 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte13g00279 bZIP_1 1.1e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00279 K25786 - qsa:O6P43_010855 200.675