Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00257 ATGGCAAATAAGATTGTAGTGTCTGCAGTATCTCTTATTCTCGTAGTAGGGGTTGCCCTTGGTGTTGTTGCTGTCGTTAGTTTCACGAACCACAAGAAATCAGACAATATATCTGTTTCTAACAAGGCTGTCACCGCCATTTGCTCCAAAACCGATGACTCAAATCTCTGCCAAGACACCATGAAGGATGTCAAAAACAAGGATGATCCAATGGAGTGCATCAAGGCTGCTCTTCAAGTCGGCGTCAATCATTTCCTCGAGGCAGTGAACATGTCCAGCAAGCTCTCTGTTGAGAAGAAAGACATAGGAAGATTGAGAGTAAATTTTGAGGACTGCAAGGATTTGTTGCAATTTGCTGTCGAAGACTTTCAAACTGTCTTGGCGACTGCTCAAGATAACAACGTCAATTCCTTGAGTAACAAGACAGGAGATCTCTTGAATCGGTTGAGCGCTGTGGTGTCTTATCAGCAAACTTGTCTTGATACCTTCATGGAAAATCAGGACCCTGCTAAGGATTTGAAATTGGACACTGCAGGCAGGCTTACCAACCTGGCTCTTCAAATCATTGACAGCTTGAGTGATATCCTTTCAGCTCTCGACTTTAAGCTCGACGTGAAGCCTGCTTCTCGTCGTCTTTTATCTCTTGACAGCCACGACTATCCGACATGGCTCTCTGCCGCTGATCGCAAGCTTCTGAATATTCCCGTTCATCCTATTCCTGCTGGAAACACTGGTAAATCCATTTATCCTCCTGCTGGAAGTGAAATAAAACCCCATGTCATTGTAGCTCAGGATGGTAGCGGCCATTTCAAGACCATCGCTGATGCTCTTAAGGCCTACCCCAAGAAACACCAAGGCAGATTCATCATCTACGTGAAGGCAGGTGTGTATCATGAGTACATTACCATTAAAAAGAAATTGAAGAACATATTCATGTATGGCGATGGCCCCACTAAGACCATTGTGACCGGAAACAAGAGCTACGCATCAGGCTATAACACTTGGAAGACTGCAAGTTTCTCCGTTGTGGGTGAAGGCTTCATGTGCAAGAATATGGGATTCGAAAACACAGCAGGACCCAAGGGACACCAAGCTGTCGCCATTCGCGTGCAAGCCAATAAGGCTGTTTTCTTGAACTGCAGATTTGATGGCTATCAAGATACCTTGTACGTCCAGGCTTACCACAATTTCTTCCGTGACTGTGTGATCAGTGGCACGATCGACTTCATCTTTGGCGACGCCTCAACAATTATCCAGAACTCGCTGATCATTGTGAGGAGGCCGGATGACAATCAACTCAATGCTATCACTGCACATGGCAGAATCTACGAACATGAAAAAACTGCTTTGGTCATCCAGAACTGCACCGTTGTCGCAGAAGAGAGACTCATGCCTGATAGGTTCAAGTTGAAGACATTCTTGGGTAGGCCATGGAAAAACGGTTCAAGGACAATTTTCATGGAATCCAATCTCCCCGACTTTATTAGGCCTGAAGGCTGGTCTCCTTGGAACGGTAATGTTCACCTTGACACCATATACTATGCCGAGTATGCAAACCGGGGACCTGGTGCTGACCTATCCAGAAGGGTCAATTGGAAGGGTTACCATGTTATGAACAAGGAAGAGGCCCAGAAATTTACTCTTGCTCCGCTGCTGTTTACCCCTGAGGATTGGATCAAGGACACCGGTGTTCCATACCACGTTGGTTTCACAGCCTAA 1719 0.459 MANKIVVSAVSLILVVGVALGVVAVVSFTNHKKSDNISVSNKAVTAICSKTDDSNLCQDTMKDVKNKDDPMECIKAALQVGVNHFLEAVNMSSKLSVEKKDIGRLRVNFEDCKDLLQFAVEDFQTVLATAQDNNVNSLSNKTGDLLNRLSAVVSYQQTCLDTFMENQDPAKDLKLDTAGRLTNLALQIIDSLSDILSALDFKLDVKPASRRLLSLDSHDYPTWLSAADRKLLNIPVHPIPAGNTGKSIYPPAGSEIKPHVIVAQDGSGHFKTIADALKAYPKKHQGRFIIYVKAGVYHEYITIKKKLKNIFMYGDGPTKTIVTGNKSYASGYNTWKTASFSVVGEGFMCKNMGFENTAGPKGHQAVAIRVQANKAVFLNCRFDGYQDTLYVQAYHNFFRDCVISGTIDFIFGDASTIIQNSLIIVRRPDDNQLNAITAHGRIYEHEKTALVIQNCTVVAEERLMPDRFKLKTFLGRPWKNGSRTIFMESNLPDFIRPEGWSPWNGNVHLDTIYYAEYANRGPGADLSRRVNWKGYHVMNKEEAQKFTLAPLLFTPEDWIKDTGVPYHVGFTA* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00257 572 PANTHER PECTINESTERASE 18 560 - -
Pte13g00257 572 Pfam Pectinesterase 259 552 IPR000070 GO:0030599|GO:0042545
Pte13g00257 572 SUPERFAMILY Pectin lyase-like 256 568 IPR011050 -
Pte13g00257 572 SMART PMEI_2 39 188 IPR006501 GO:0004857
Pte13g00257 572 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 195 IPR035513 -
Pte13g00257 572 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 192 IPR035513 -
Pte13g00257 572 ProSitePatterns Pectinesterase signature 2. 403 412 IPR033131 -
Pte13g00257 572 Gene3D - 253 570 IPR012334 -
Pte13g00257 572 CDD PMEI-like_3 46 193 - -
Pte13g00257 572 NCBIfam pectinesterase inhibitor domain 19 167 IPR006501 GO:0004857
Pte13g00257 572 FunFam Pectinesterase 253 570 - -
Pte13g00257 572 Pfam Plant invertase/pectin methylesterase inhibitor 43 187 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00257 Pte-Chr13 1837002 1838820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00257 4 572 Carbohydrate Esterase AT3G05610 39.724 1.45e-150 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00257 K01051 - jre:108981763 563.533