Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00251 ATGGAAGATGAGCCCTTTCTTACCTCCCAAATAAGGTCATCGATTTCTTCACAACTGGAACCCGTCCTCCAAGGTCATTATTTCTCCTTTAGTGGTGTACTTCCTCAGTCTTGTTCTTCTGATGACCCAATTATTTCCCAAGAAATCCTACATGGACATGGTCATGATCAGATCCAGGACCCACAATCTTCAGCTCAATTATTGTCTTCTAAATCATGGAGGACGCTCGGATCAAAGAAACCAGCTACTCTTCGTCGCAGCAAGACTGCCCCTGCCATGGTTGTCCCGAGAGACCTAAAACCAAAGACACCCCCGATTCCAAAACCACAGTCTGTCTCTGGTTCCGTCATCAGGCAAGGAATTTTGTTGCTTTTCGTTTATCTTTCTGTTGGGGTCGCCATCTATTCTTTTAACAGTGATCACTTCTCCGGTACAGAGACTCACCCTGTAGTGGACGCCTTCTATTTCTGCATAGTTACCATGTGTACCATCGGCTATGGGGACATAACTCCTGTCACGCCGGCCGCCAAGACCTTTGCTTGTGCCTTTGTATTGATTGGGTTTGGATTTATTGACATATTGCTTAGTGGGGTTGTCAATTATGTGTTGGACTTGCAAGAAAATATGATCTTGACTGGGCTTCAAATGGGTGCAGATAATCGCAGTAGGCCTCAAGAACGATTTTCTCCAAGAAATTACATTATCGATGTGGCGAAGGGCAGGATGAGAATCAGATTGAAAGTTGGACTGGCACTTGCTGTGGTTTTCTTGTGCATTGGGATGGGAGCTTTGATTTTGTATTTTGTGGAGAACCTGGATTGGATTGACTCTGTTTACTTAGCCGTTATGTCGGTCACAACCGTGGGGTATGGCGACAAAGCATTCAAGACACTCGGCGGGCGGCTGTTTGCGGCAGTGTGGCTTCTTGTTTCAACTCTTGCAGTGGCTCGGGCATTTCTTTATTTGGCAGAGGCCAGAGTTGACAGACGGCATCGGAGAATTGACAAGTGGGTCTTACATAGAGATATTACTGTCGAGGATTTGCTTGCTGCAGATATCAACAACAATGGCTTCATCAGCAAGTCGGAGTACGTAATCTACAAATTGAAAGAAATGGGGAAGATCCGGGACAAAGATATTTTGCAAATATGCGATCAATTTAGTAAGATAGATCCTGCCAACTCCGGGAAGATAACTTTGCCCCATCTCTTGGGGAGCCGATTGTGA 1227 0.4548 MEDEPFLTSQIRSSISSQLEPVLQGHYFSFSGVLPQSCSSDDPIISQEILHGHGHDQIQDPQSSAQLLSSKSWRTLGSKKPATLRRSKTAPAMVVPRDLKPKTPPIPKPQSVSGSVIRQGILLLFVYLSVGVAIYSFNSDHFSGTETHPVVDAFYFCIVTMCTIGYGDITPVTPAAKTFACAFVLIGFGFIDILLSGVVNYVLDLQENMILTGLQMGADNRSRPQERFSPRNYIIDVAKGRMRIRLKVGLALAVVFLCIGMGALILYFVENLDWIDSVYLAVMSVTTVGYGDKAFKTLGGRLFAAVWLLVSTLAVARAFLYLAEARVDRRHRRIDKWVLHRDITVEDLLAADINNNGFISKSEYVIYKLKEMGKIRDKDILQICDQFSKIDPANSGKITLPHLLGSRL* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00251 408 SUPERFAMILY Voltage-gated potassium channels 236 349 - -
Pte13g00251 408 SUPERFAMILY Voltage-gated potassium channels 115 202 - -
Pte13g00251 408 Gene3D - 233 344 - -
Pte13g00251 408 Gene3D - 110 221 - -
Pte13g00251 408 PRINTS Two pore domain K+ channel signature 159 187 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pte13g00251 408 PRINTS Two pore domain K+ channel signature 286 295 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pte13g00251 408 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 150 381 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pte13g00251 408 SUPERFAMILY EF-hand 350 402 IPR011992 -
Pte13g00251 408 ProSitePatterns EF-hand calcium-binding domain. 352 364 IPR018247 -
Pte13g00251 408 Pfam Ion channel 255 323 IPR013099 -
Pte13g00251 408 Pfam Ion channel 123 202 IPR013099 -
Pte13g00251 408 FunFam Two-pore potassium channel 3 231 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00251 Pte-Chr13 1800526 1802803 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00251 45 409 Ion Channels AT4G01840 65.761 5.09e-167 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00251 K05389 - tcc:18613801 550.436