Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00247 ATGGAAAATCAACCACAAAGTGAACTTCATTTACGCAGCTCCGACGAGATCTCTTTTCATAAGAGATCCCATAGGCATCCCCTCCAAGAAGTAGATTTCTTTGCAGGTGCTGAGGTCAATAATAAAGCCAAGCTTGACGTCCATGATGATCCTGATCGATTTCGTCTGAAAGGGCCATCCGCATCAAGACGCCATACACCCGATCCAAGTGTAAATATTGGATTGAATCTTAGAAGCCCTACTTCTGAAGCGACGAGAAAAACAGATGGAGATGATCATCATGAAAAGAAGACCAGCGAAATTTTGACACTCCAAAACGAGTTAAAGAGACTACAAGAGGAAAATCGCAAACTGAATACCGTGGTCGAGCAAATCAAGAACTACTGCAACCAACTGCAAGCTCAATGGTACATCTTCATGGAGCAGCGGAATACGCAGAAAATAGTACCTAGAACGTCATCGGACCAAGAATGGATGGACCCACGACCGTCTACCGATGTCAATGATCATTCGGTCTCAGATGGGAAGGCGCGAGAAACATCAGTTTCTCCATCAAACACCGAGGTAATGCCTGAAAGTGGACACCCTATCACCGAGTTTATTGGCAAACAAGTAAAGGAAAGTCTCGATTGCCCGTCTCAAAGCTGTAGATCCCCCAAAGGTCCGAAGTTGCATGATATAGAAAACCAAGAACAAATGGCCGATGTTCCTTTCAAGAAAGCAAGAGTGTCTGTACGTGCACGATCCCAAGCCCCTACGATCGGCGATGGTTGTCAATGGAGGAAATATGGTCAAAAGATGGCCAAGAGTAACCCTTTCCCTCGCGCCTACTATCGTTGTACAATGGGTGTGGCCTGCCCCGTACGTAAGCAGGTGCAAAGATGTGCGGAGGACAGAAGTGTACTTATAACAACTTACGAAGGCAATCACAACCATCCTCTCCCTCCAGCAGCCACTGCCATGGCTAATACTACGTCGGCAGCAGCAGCCATGCTTTTATCAGGTTCCACTTCCACCAAAGAAGCCTTTGCAAACTCAGCAGGTTACTTTCATTCCATGCCCTTCACATCAACTATGACCACAATATCATCCTCTGCACCATTCCCAACCATTACTCTCGACTTGGCTCAAAGCCCTAGAACCATGCATTTGCACCGTGCACTGCCCCCCACCCCCACGCTTCCACTGCCATTGAACTGCTGTCCCCAGATACCTGGGCATCCTTTGTTCTATGCTCCGAAGATTCATGCAGTTGAACTGGGACAGCCACAGGCGGCTATTGTTGAGTCGGTTACTGCAGCCATTGCTACTGATCCTAATTTTACTGTAGCTCTGGCAGCAGCAATCTCCACATTCATGGGTGCCAATCATGGCAACATGGAAGGGAATAATAACCAAGGTGGAGGTGAAAGTGCCAATCCCACCAATGGATTATTGCCTCCTGGATCCCCTCAATTTCCTCAATCATGTATGACATTCTCCGGCAGCTAG 1491 0.4748 MENQPQSELHLRSSDEISFHKRSHRHPLQEVDFFAGAEVNNKAKLDVHDDPDRFRLKGPSASRRHTPDPSVNIGLNLRSPTSEATRKTDGDDHHEKKTSEILTLQNELKRLQEENRKLNTVVEQIKNYCNQLQAQWYIFMEQRNTQKIVPRTSSDQEWMDPRPSTDVNDHSVSDGKARETSVSPSNTEVMPESGHPITEFIGKQVKESLDCPSQSCRSPKGPKLHDIENQEQMADVPFKKARVSVRARSQAPTIGDGCQWRKYGQKMAKSNPFPRAYYRCTMGVACPVRKQVQRCAEDRSVLITTYEGNHNHPLPPAATAMANTTSAAAAMLLSGSTSTKEAFANSAGYFHSMPFTSTMTTISSSAPFPTITLDLAQSPRTMHLHRALPPTPTLPLPLNCCPQIPGHPLFYAPKIHAVELGQPQAAIVESVTAAIATDPNFTVALAAAISTFMGANHGNMEGNNNQGGGESANPTNGLLPPGSPQFPQSCMTFSGS* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00247 496 MobiDBLite consensus disorder prediction 162 176 - -
Pte13g00247 496 MobiDBLite consensus disorder prediction 65 83 - -
Pte13g00247 496 ProSiteProfiles WRKY domain profile. 249 315 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte13g00247 496 MobiDBLite consensus disorder prediction 150 194 - -
Pte13g00247 496 MobiDBLite consensus disorder prediction 84 99 - -
Pte13g00247 496 Coils Coil 94 135 - -
Pte13g00247 496 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 88 465 IPR044810 GO:0003700
Pte13g00247 496 MobiDBLite consensus disorder prediction 459 496 - -
Pte13g00247 496 SUPERFAMILY WRKY DNA-binding domain 248 315 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte13g00247 496 MobiDBLite consensus disorder prediction 1 23 - -
Pte13g00247 496 Gene3D WRKY domain 239 316 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte13g00247 496 MobiDBLite consensus disorder prediction 48 62 - -
Pte13g00247 496 Pfam WRKY DNA -binding domain 256 313 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte13g00247 496 SMART WRKY_cls 254 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte13g00247 496 MobiDBLite consensus disorder prediction 48 99 - -
Pte13g00247 496 FunFam probable WRKY transcription factor 31 239 316 - -
Pte13g00247 496 MobiDBLite consensus disorder prediction 177 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00247 Pte-Chr13 1764295 1767374 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00247 30 464 WRKY Transcription Factor Family AT1G62300 40.421 3.45e-82 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte13g00247 WRKY 1.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00247 - - jre:109007774 428.328