Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00210 ATGGGCGGAGGCGAGACGGGGGCACAGTACGCGGAGGCGCAGTACGTGTCGGCGAAGACTTCTGTGTGGTGGGACATTGAGAACTGTCATGTCCCAAAGAATTGCGATCCTCACACTATCGCACAGAACATCAGCTCTGCTCTTGTTAAGATGAACTACTGTGGCCCGGTCTCCGTCTCCGCATATGGTGACACGACTAGGATCCCATCATCTGTACAGCACGCCCTCTCGAGCACAGGCGTCACGCTCAACCATGTACCTGCTGGTGTTAAAGATGCCAGTGATAAGAAGATTCTCGTGGACATGTTGTTCTGGGCGGTGGATAATCCTGCACCTGCTAACTACTTATTAATCTCTGGAGATAGGGACTTTTCTAATGCACTCCATCAGTTACGGATGAGAAGGTATAATATTCTTTTAGCTCAACCTCAGAAAGCATCTGCTCCCCTTATTGCAGCTGCAAAAAGTGTATGGCTATGGACAAGTCTCCTAGCTGGAGGACCTCCATTAAGCAATGGCGATTCACGACAGCCTGATACCAATAATTTTCTCTCTAGCTCTGACAACTTCACATCTCAAGTGCCTAGTGCTTACCAAAAAAATCAACATGTGGATTCCACTTCTGCTATTCGGCACAAGGGGAATAACAAATTTCTGAATGGGGGAAGAGGATGTGATCCTAGATCTCAAACTAAAACCAATTGGAGAAACTCAAGTCAACTAAACGGGTCAAACACCGTGAATCTTTCGACTATGTATCAAGAAGATTTTAGCGGTATTATCCCACATCATTCTGGATCCTGTCCACCCAATATTCCTTTAAGCGGATCTGCTTCAAGTTTAATTCGTGGCAGTTCTGTTCCTTCATGGAGCAATAACAACAATATCCCCAGCAATCATCATAGTCAATTTCCACAGCAACTAAGGCTGAACAACGTTGGCACACTGCCTGCTTCTGCACCAAGTAATCTATATCCACCTTCATCAGTACTGCCTAGGGCTATTGCTCCCAGCTTCACCTCAGGGCCGCATACATCTTTTCCAGATATTGTTGGTAATCCACACGTGTCTGAATATCAAAACAACATTCGTGCACCTCATACTGTTCAACAATGGAATGAAGACCTAAAACACGACCCGGTTAACAAGTTTCCAAATTCTGCAAGGTCAAACAGCGAACTAAATGGGCATATGTCTCATAATTCCCCACAATTACAGTATACTCATGCTCAGATTCCAGAACCTCCAACTTCATCTTCTGCAGCAATAACCAACAAGAATGGTGTTTGGGGTTCTCATGGATGTCCCAAACCTTCTGAATACGTCCAAGGTCTTATAGGGGTTGTTTTACTAGCATTGAACACTCTACAATCTGAAAAAATAATGCCGACTGAAGCAAATATAACCGATTGCATTCGTTATGGAGATCCAAGGCACAGGAACACTGATATAAAGAAGGCACTGGAGAGTGCTATTGAGCAGCAAATGGTGGTGAAACAAAATTTAGGTGCTTTGCAGTTTTATGTTGGTAAGAACGAGAAACTTTGGAAATGTGTAAACCCCATTGGTGGTAGTCCTAAGCAATATCCAAAGTCTACTTGGGATGAAATTCAATTTTTCCTGAAAACTCCGAATGGAAGATCGGCAATAATGGCATCGAGTTGCAAATATGAAGCTGCTACTATGATTAAGAATATGTGCTTGAAGGATCTTGCTCTAGGTAATGTCCTTCAGATATTGAACATGGTAATCACTACGAAGAAATGGGTTCTTCACCATCAATCAGGATGGCAGCCTCTTAGCATTAATCTCCCAGAAAATAACAGTGACGCTGGGTCATAG 1842 0.437 MGGGETGAQYAEAQYVSAKTSVWWDIENCHVPKNCDPHTIAQNISSALVKMNYCGPVSVSAYGDTTRIPSSVQHALSSTGVTLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLIAAAKSVWLWTSLLAGGPPLSNGDSRQPDTNNFLSSSDNFTSQVPSAYQKNQHVDSTSAIRHKGNNKFLNGGRGCDPRSQTKTNWRNSSQLNGSNTVNLSTMYQEDFSGIIPHHSGSCPPNIPLSGSASSLIRGSSVPSWSNNNNIPSNHHSQFPQQLRLNNVGTLPASAPSNLYPPSSVLPRAIAPSFTSGPHTSFPDIVGNPHVSEYQNNIRAPHTVQQWNEDLKHDPVNKFPNSARSNSELNGHMSHNSPQLQYTHAQIPEPPTSSSAAITNKNGVWGSHGCPKPSEYVQGLIGVVLLALNTLQSEKIMPTEANITDCIRYGDPRHRNTDIKKALESAIEQQMVVKQNLGALQFYVGKNEKLWKCVNPIGGSPKQYPKSTWDEIQFFLKTPNGRSAIMASSCKYEAATMIKNMCLKDLALGNVLQILNMVITTKKWVLHHQSGWQPLSINLPENNSDAGS* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00210 613 MobiDBLite consensus disorder prediction 384 401 - -
Pte13g00210 613 Gene3D - 12 162 - -
Pte13g00210 613 Pfam NYN domain 19 155 IPR021139 GO:0004540
Pte13g00210 613 Pfam OST-HTH Associated domain 554 602 IPR025677 -
Pte13g00210 613 MobiDBLite consensus disorder prediction 382 401 - -
Pte13g00210 613 CDD PIN_limkain_b1_N_like 19 143 - -
Pte13g00210 613 PANTHER LIMKAIN B LKAP 17 498 IPR024768 GO:0005777|GO:0010468
Pte13g00210 613 MobiDBLite consensus disorder prediction 213 243 - -
Pte13g00210 613 MobiDBLite consensus disorder prediction 226 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00210 Pte-Chr13 1540191 1543921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00210 11 251 C2H2 Transcription Factor Family AT5G61190 60.494 5.41e-84 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00210 - - qsa:O6P43_007380 801.201