Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00208 ATGGCTGGTGATCTCAATGCTGGATTGTCCAAGAAGATTCCCATATTTGGTCTTAAGGTTTGGGAGTTAGTCGGGATCGCAGTAGCTTTATTTATAGTCATTATTCTTTTGGTTCTCGCTCTATATCTTACTTCTAGAAAGAAATCAAGAAAAAGTAAGGAAAAGATTCCTCATCATCAAATACCAGTTGTCTCAAAGGAAATCAAGGAAGTGAGGATTGAGCAAGTATCGGCTAATGAATTTGTTCCTCGTGATGGAATACTCCTTACAATACAGGACAAATCTAGTGATAGAGAATCAGACAAAGTTATGGTCCACCTGGGTGTGGGGAAGACCAAAGCCGGAAACAATAGCAGTCGTTCAGGTTCCTTCCACCATGTAGATAAAGACAGGACAGGTTCACAATCAGGTGAAGATGGGAGTTCTGGAACAGTCTCAGTGTATAAACCGGCTTCTTCCTACAATGTTGCTCCTTCTCCTCTAGCTGGATTACCTGAGTTCTCTCATTTGGGTTGGGGTCATTGGTTCACACTAAGAGATCTTGAACTCGCAACAAACCGATTTTCCAAAGAGAATGTATTAGGTGAAGGTGGGTATGGAGTTGTCTATCAAGGACAGTTAATCAATGGGACTCCAGTTGCAGTTAAAAAGATACTCAACAATATTGGTCAAGCAGAAAAGGAATTTAGGGTGGAAGTTGAGGCCATTGGACACGTAAGGCATAAGAATTTGGTTCGCCTTCTGGGTTACTGCATTGAGGGTACTCAGAGGATGCTAGTATATGAGTATGTCAACAATGGCAACTTAGAACAGTGGCTTCATGGAGCTATGCGCCATCATGGTTATCTAACGTGGGAAGCCCGCATGAAGATTCTCGGTGGCACTGCAAAAGCCCTTGCATATTTACACGAAGCGATCGAACCCAAGGTTGTGCACCGAGATATCAAGTCAAGCAACATTTTAGTTGATGATGATTTCAATGCAAAGGTTTCTGACTTTGGCCTGGCCAAATTACTGGGCGCTGGGAAAAGTCATGTCACTACACGAGTTATGGGCACGTTTGGATATGTGGCTCCTGAATATGCAAATACTGGACTCCTAAATGAAAAGAGTGATGTCTATAGCTTTGGGGTTTTATTATTGGAAGCAATTACTGGAAGAGATCCCGTGGATTACGGTCGCGCTGCGCAGGAGGTGAATCTGGTTGATTGGCTGAAGATGATGGTTGGCAATAGGCGATCAGAAGAAGTTGTAGATCCAAACATTGAAGTTAGACCACCGACCAGAGCTCTAAAACGGTCCCTCTTGACTGCTTTAAGATGTGTTGACCCTGATTCTGAGAAAAGACCAAAGATGAGTCAAGTTGTGCGGATGCTTGAATCTGAAGAATATCCTATCCCAAGAGAGGATCGAAGACATAGAAGAAACCATGGCAGTAGCATGGAGATTGAGCCTCAGAGGGAATATTCCGATACAGACCGGAGTGAGAATAACGGTCCAACATCAGAGAGCAAGCTTTCAGAAGACGTAAAGAAATACTAA 1542 0.4319 MAGDLNAGLSKKIPIFGLKVWELVGIAVALFIVIILLVLALYLTSRKKSRKSKEKIPHHQIPVVSKEIKEVRIEQVSANEFVPRDGILLTIQDKSSDRESDKVMVHLGVGKTKAGNNSSRSGSFHHVDKDRTGSQSGEDGSSGTVSVYKPASSYNVAPSPLAGLPEFSHLGWGHWFTLRDLELATNRFSKENVLGEGGYGVVYQGQLINGTPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTQRMLVYEYVNNGNLEQWLHGAMRHHGYLTWEARMKILGGTAKALAYLHEAIEPKVVHRDIKSSNILVDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEAITGRDPVDYGRAAQEVNLVDWLKMMVGNRRSEEVVDPNIEVRPPTRALKRSLLTALRCVDPDSEKRPKMSQVVRMLESEEYPIPREDRRHRRNHGSSMEIEPQREYSDTDRSENNGPTSESKLSEDVKKY* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00208 513 Pfam Protein kinase domain 189 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00208 513 CDD STKc_IRAK 194 460 - -
Pte13g00208 513 MobiDBLite consensus disorder prediction 446 513 - -
Pte13g00208 513 SUPERFAMILY Protein kinase-like (PK-like) 172 468 IPR011009 -
Pte13g00208 513 FunFam Putative receptor-like serine/threonine-protein kinase 264 475 - -
Pte13g00208 513 FunFam Putative receptor-like protein kinase 170 263 - -
Pte13g00208 513 SMART serkin_6 188 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00208 513 MobiDBLite consensus disorder prediction 111 145 - -
Pte13g00208 513 Gene3D Transferase(Phosphotransferase) domain 1 264 474 - -
Pte13g00208 513 ProSiteProfiles Protein kinase domain profile. 188 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00208 513 Gene3D Phosphorylase Kinase; domain 1 170 263 - -
Pte13g00208 513 ProSitePatterns Protein kinases ATP-binding region signature. 194 217 IPR017441 GO:0005524
Pte13g00208 513 MobiDBLite consensus disorder prediction 446 494 - -
Pte13g00208 513 PANTHER OS01G0323000 PROTEIN 5 490 - -
Pte13g00208 513 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00208 Pte-Chr13 1506258 1510938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00208 17 462 Trihelix Transcription Factor Family AT1G70460 40.355 9.86e-92 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pte13g00208 Pkinase 3.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00208 - - vvi:100261416 838.18