Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00200 ATGGCAAGCGATATCATTCCAATATTGGCTATGGTTATAGTGCAAGTTGGATACGCAGGGATGAATATCACATCAAAGCTTGCCATGGAGTCAGGCATGAACCTACTTGTCCTCGTTACTTATAGGCAAATCTTTGGGGCGCTTGCTATTATCCCTTTCGCTTTATGGTTAGAAAGGAAAGTAAGGCCCAGGATGACAGTGGCTATCCTCTTCCAGATCTTCGTCTGCTCCTTAACAGGGGCAACAGGAAACCAGGTCCTCTACTTTGTTGGATTGAGAAACTCAACCCCAACTGTAGCATGTGCGATCAACAATGTGCTTCCTGCAATCACATTCATCCTGGCAGCCGTCTGCAGGCAAGAATCTGTTGGAATGAAGACTAGGAGAGGACAAGCTAAGGTGATAGGAACTCTCGTGGGGATTGCTGGAGCACTGGTCTTGTCATTCTACCATGGAAAATCCATTGGATTGGGTGAATCAAGAATTCACTGGAAATATGCAGATAAACTAACGCAAGAAACAAACTCTGCCGATAGAGGAAACTCCATTTTAGGCTCCTTTGCTGTGATTGCTAGCTGTGTGTCTCTGTCCATATGGTTCATAGTCCAAGCAAAATTGAGCCAGAAGTTTCCAGCTCCTTATACGAGCAGCTCATTCATATGCATACTCTCAAGCATCCAGTGTGCACTTATCGCAATGTGTTTTGAACACAGACCCGCGGCCTGGTCTTTGTCCAATTCCATGAGACTTACTTCCTCGCTTTACGCGGGAATTGTGTGTAACGGGATAACGTTTTGCCTCATGTCCTGGACCATTCAAAGGAAAGGCCCCTTGTTTGTTTCGGTATTCAATCCCCTGCTGCTTGTCATCGTTGCTTTTCTAAGCTGGGCCTTGCTTCGCGAGAAGTTATATGTCGGAACTGCCATTGGGTCCCTTTTGATCGTGCTAGGGCTTTACGCTGTACTCTGGGGAAAGAAAGAGGAGATGAAATCGATACAAGGAATGCAAGAAACTGAAATGGGTATGAAAGATCACAAGCAAGTGCAGCCTACTGATCTGGAGTTTCAGTAG 1071 0.4575 MASDIIPILAMVIVQVGYAGMNITSKLAMESGMNLLVLVTYRQIFGALAIIPFALWLERKVRPRMTVAILFQIFVCSLTGATGNQVLYFVGLRNSTPTVACAINNVLPAITFILAAVCRQESVGMKTRRGQAKVIGTLVGIAGALVLSFYHGKSIGLGESRIHWKYADKLTQETNSADRGNSILGSFAVIASCVSLSIWFIVQAKLSQKFPAPYTSSSFICILSSIQCALIAMCFEHRPAAWSLSNSMRLTSSLYAGIVCNGITFCLMSWTIQRKGPLFVSVFNPLLLVIVAFLSWALLREKLYVGTAIGSLLIVLGLYAVLWGKKEEMKSIQGMQETEMGMKDHKQVQPTDLEFQ* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00200 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 150 - -
Pte13g00200 356 Pfam EamA-like transporter family 7 148 IPR000620 GO:0016020
Pte13g00200 356 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020
Pte13g00200 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 326 - -
Pte13g00200 356 PANTHER WAT1-RELATED PROTEIN 7 335 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00200 Pte-Chr13 1441343 1444112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00200 3 326 Nodulin-like Gene Family AT1G09380 61.420 1.09e-153 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00200 - - qsa:O6P43_011007 473.781