Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00198 ATGAGTCCCAAGGAAAACCCAGAGACAACCATAGAAATTAATGGGTTGTGTTTTACTTACCCAGGAATAGACGGCCATCCTCCCCCAGGTTCCTCTCCCCTCATCAAAGATTTCACTTTGACGCTCAGTTCTGGTGATCGTTGCTTGCTTGTTGGATCCAATGGCGCTGGCAAAACCACAATACTCAAGATATTAGGAGGGAAGCACATGGTAGAGCCACATATGGTTCGTGTCCTTGGAAGATCGGCTTTCCATGATACTTATTTGACATCGTCTGGTGATCTGTCGTATCTAGGAGGAGAGTGGAGGCGTGATGTTGCTTTTGCTGGATTTGAAGTTCCGATACAAATGGATGTCTCCGCCGAGAAGCTGATTCTCGGAGTACGTGGGATTGATTGTGGAAGAAGAGACGAGTTAATCAAGGTATTAGATATTGATTTGTCATGGAGGATGCACAAGGTTTCGGATGGGCAGAGAAGACGAGTGCAAATCTGTATGGGTCTTCTCAAGCCATTTAAGGTTCTTCTTCTTGATGAAATAACAGTTGACCTTGATGTTCTAGCAAGGGCTGACCTCTTGAAGTTTCTGAAAAAGGAGTGTAAAGAGCGAGGTGCCACTATTATCTATGCAACCCATATATTCGATGGTCTTGAGGATTGGCCATCACATATGGTTTATGTGGCCCATGGGAAGTTGCAACTTGCAATGCCCATGGATGAAGTCAAGAAAAACAGCAAATTGTCTCTGATGAGAACAATTGAGAGTTGGCTGAGAAAAGAACGAGACGAGGAGAGAAAAAAGAGGAAAGAAAGAAAGGAGCATGGTCTTCCTGAGTTCGAGAAGCAAATTGAGGGAAGCCGTGTGATAGGAGATCCAGCTCGTGCTGCTGTTCGTGCAACGAACAATGGATGGGCAGCAGGACGGCTTCATTCCACTGTTGCTGGTGAAGAGAACTTCGTTCTCAGCTCAAACCGCGTGCTGAGGCAGTAA 990 0.4576 MSPKENPETTIEINGLCFTYPGIDGHPPPGSSPLIKDFTLTLSSGDRCLLVGSNGAGKTTILKILGGKHMVEPHMVRVLGRSAFHDTYLTSSGDLSYLGGEWRRDVAFAGFEVPIQMDVSAEKLILGVRGIDCGRRDELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLKFLKKECKERGATIIYATHIFDGLEDWPSHMVYVAHGKLQLAMPMDEVKKNSKLSLMRTIESWLRKERDEERKKRKERKEHGLPEFEKQIEGSRVIGDPARAAVRATNNGWAAGRLHSTVAGEENFVLSSNRVLRQ* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00198 329 Coils Coil 253 273 - -
Pte13g00198 329 Pfam ABC transporter 36 181 IPR003439 GO:0005524
Pte13g00198 329 Gene3D - 7 288 IPR027417 -
Pte13g00198 329 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 10 258 - -
Pte13g00198 329 SMART AAA_5 44 231 IPR003593 GO:0016887
Pte13g00198 329 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 251 IPR027417 -
Pte13g00198 329 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 254 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00198 Pte-Chr13 1433773 1436785 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00198 11 185 Calmodulin-binding Proteins AT2G36910 25.521 7.48e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00198 K12608 - tcc:18597751 554.288