Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00189 ATGGCACCGAAATCCAAACCCAATGCCAATTCCAACCCGCATTTTAAGCCCGGGTCTGTTATTGAAATCAGCTCCGACGATGATGGTTTCCGGGGTTCGTGGTACGCCGGCACCGTTATTCGCCGCTGCTCGTCCAAGAATAATAGGGACAATTATTTGGTGGAATACACGACCCTTATGGCGGACGAGGAAGGCACCAAGCCTTTAAGAGAAACGCTCGATATTATCCAGCTCCGGCCTGTTCCGCCTAGAGAAATTGACTGGAAATTCAAGTTCGGCGACGAGGTGGATGCTTACTATAATGATGGTTGGTGGGAAGGTGCGATAACTGAAGAACACGAGAATGGAAAGTTCTCAGTGTTCTTCAGAGGTTCAAGGGAGCAGATGATATTTGGGAGTGAAGAATTGAGGCTTCACCGAGAGTGGATCAATGAAAATTGGGTTCCTCCTTTGAAACAAGAAAAATTATCAATACCAAACGAAGTGAAGCCTTGTACAACAATGGCAAAGGAGCATTTTGGTGAGGGGACCGTTGTTGAGGTTAGCAGTGATGAAGATGGTTTTCAAGGTGCCTGGTTTGCTGCCACTATTGCTAAACGAATCAGTAAAGATAAGTTCCTTGTTGAATACCAGACCTTGCGGAGTGATGATGATTCAGAGTTTCTGAGAGAGGAGATTGATAGTTTCCACATACGCCCCAACCCACCAGAAATCTGCGTTGATGGTGAATTTAGTCTACTTGAGGAAGTCGATGCTCTGTACAATGACGGTTGGTGGGTAGGAGTGATTTCCAAAGTTCTTGACAAGTCAAGGTACATAGTTTACTTCAAGGGAACCAATGAAGAAATGGAGTTTCAGCAGTCTCAACTGAGACTTCATCAAGAGTGGATTAATGGAACTTGGGTCGTTGCATCCAAGGTATATTCTCTCCCGTAA 936 0.453 MAPKSKPNANSNPHFKPGSVIEISSDDDGFRGSWYAGTVIRRCSSKNNRDNYLVEYTTLMADEEGTKPLRETLDIIQLRPVPPREIDWKFKFGDEVDAYYNDGWWEGAITEEHENGKFSVFFRGSREQMIFGSEELRLHREWINENWVPPLKQEKLSIPNEVKPCTTMAKEHFGEGTVVEVSSDEDGFQGAWFAATIAKRISKDKFLVEYQTLRSDDDSEFLREEIDSFHIRPNPPEICVDGEFSLLEEVDALYNDGWWVGVISKVLDKSRYIVYFKGTNEEMEFQQSQLRLHQEWINGTWVVASKVYSLP* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00189 311 CDD Tudor_Agenet_AtDUF_rpt1_3 15 83 - -
Pte13g00189 311 CDD Tudor_Agenet_AtDUF_rpt2_4 246 292 - -
Pte13g00189 311 Gene3D - 162 244 - -
Pte13g00189 311 MobiDBLite consensus disorder prediction 1 22 - -
Pte13g00189 311 MobiDBLite consensus disorder prediction 1 18 - -
Pte13g00189 311 CDD Tudor_Agenet_AtDUF_rpt1_3 173 236 - -
Pte13g00189 311 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 8 156 - -
Pte13g00189 311 SMART agenet_At_2 242 298 IPR014002 -
Pte13g00189 311 SMART agenet_At_2 13 86 IPR014002 -
Pte13g00189 311 SMART agenet_At_2 88 144 IPR014002 -
Pte13g00189 311 SMART agenet_At_2 171 239 IPR014002 -
Pte13g00189 311 Pfam Agenet domain 176 236 IPR008395 -
Pte13g00189 311 Pfam Agenet domain 93 151 IPR008395 -
Pte13g00189 311 Pfam Agenet domain 18 83 IPR008395 -
Pte13g00189 311 CDD Tudor_Agenet_AtDUF_rpt2_4 93 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00189 Pte-Chr13 1393745 1396369 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00189 183 300 PHD Transcription Factor Family AT5G58610 26.429 2.68e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00189 - - qsa:O6P43_007411 452.595