Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00175 ATGGAGGTTGAGAAAAGGCGCTCGAGGGGAAGCTTTCTCAGCCTTTTCATTTGGAGTGGAAAATCCAGGAAGAAGCTCTTCGGGAATGATTCCGAGTTATCTGGGGAGCTAATGAAAGGAACACAGAATGCTGAGAACATACTGAAGTCACAGCTTAGTGGGTTACCAATAGAGCTGGATGAAAACATAGCAAGTTCAAGCAATATGGGATGCAGTGATTATAATTGCGAGTCATCAACCAATAGCGATGGAGGACGTGAGACTAGAGGCCCTGGAGTTGTAGCCAGATTAATGGGTTTGGATTCATTGCCATCTTCAAGTTCTTCGGAGTTAGCCTCTTCTGCATCTTTTGATTCTCCCCCTCTCAGATCGTCTCATCATTATGATAGAAATGCTTATGATGTGCTGAGTGACTATCGTTCTGTGGACCACATCAACCTAAGGTCGAAGCTGGAAAAGTCTTGGAATACTTTGGAATTGAGGCAAAAGGTGCAGAAGAGACCTATTGAGAGATTTCAGACTGAAATTTTACCCCCAAGGTCGGCAAAATCAATTCCTATCACTCACCATAAGCTGTTGTCTCCAATAAAGAGCCCTGCATTTATCTGTACTAACAATGCAGCACATGTAATGGAGGCAGCTGCTAAGATAATGGAGGGAAGCCCCAGAGCATATAATGTAAATAAAACACCATCCATTGGGTCATCTTCTGTCCCATTGAGGATTATGGATTTGAAAGAGAAACTGGAAGCTACACATCATGCATCTGTTATCGACAGGAAAGTGAGACCCAATACCTCTAGTGATACAAAAGGAAAGCCTACTGATAAGAGTTATAGTAAATCTAAACTAGTCCAATCATCAAAAGGCACTGGAGATTCAGAGAGTTCAAATCATTCAAGGACCAAAGGGAAAGTGGTTTCACTAGCAATTCAAGCGAAAAAAAATGTTCAGAGCAGAGAGATACTGGTTTCATGTAGTAATAGGAATATTGTGAACCGCAAGGAACAGAATGTCAAGTTAAACCAGTGTTCCAGAAGCCAGCAAGTTGTGCAACACACTGTGCAGCAGAAAACCTCCACAAGCAAGACCCATAATGTACTCGTGTATAATAGTCAAAAACAGAATGCTGACACTGTTAAAGGTAAATCAGCTCCAAAACTCCCAGCTTCCAAGCAACCAACCAGAAGAACTAGATCATTGAAAGTTTCAACTGGAGAAAATGAGTCTTCAAGCAAAGCTTTTATCCAGTCCAAGAGTGGCCCGACAAGATTTAGTACATCAGTAACTGATGATCAGAAACCTTTGTCATTATCTAAAACGAAGAGCACCTCCCAAAAGAAGAGGTCTACCCGCAGAGATATTCTGCTAAAGGAAACAATAGTAGACAATGTGCAAATCCATTTTGATGAGAGATCCATAAAATGTAATATTACAACTGATGGGTCTAAGAACCACCATTCAGATGATATGAAACAAAGCATGGACATTGTATCATTTACATTCACATCTCCTTTAAGATCACATTCGACTACTCAAGTCATGGAAATAAAGAACAGCTTTGAGATAGATTCTTTTCGGGGCGATGATCGGCCTCATCCCCAGGCATTATCATTGTCTTCTTCTGAGTTACATATGATAGATGGTGGTGCTTTAAGTTCAATTTTGGATAAAAAGCTGCAGGAATTGACCTTCATGATTCAGTCATCTCAGTGCAACCTGATTCAAGAGGGACCTTCAGCCATTTCTACATCAGCTTCATGTGACTCTGCCCCAATTCTCCCGGGCACTACTTCAAAAGAAGATGGAAAGTTTCAACTTGATCCAGATGGTGAGACATTGGATGGTCCATTTGAGGGATGTTGTTCTTCAAGTGATAATTCGGTGCTTTACTTGAACCTGCATTTGCAGGGTACAGAATCAACGGAAGAAAGTTACTCCAGCCACAGCAAGATCGTGGAAATTAGAAATGAAGTTGATTCTCTTTATTCTAGACAAGGAAGCAGAGCAGTTTCCTATTTCCAACAACTAAATGATTGTCTAGCCCAGAAGGTTGATCTGGAGTTGTCTGAGTCAAGCTCTTCAACTTTAACCAGGAACATGAGCATCGGCTGTGTAAGCAGAACATGCAGTGCAACAGACTTCAAGAGATCAAACGATTGGGAACTAGAATATATTAGGGACATGCTTGACCAGTTAGAATTGACAGGAGAGGATTTTATGCTGGGTCAAGCCTACAAGTTACTAACGCCGAGCCTCTATGATATGTTGGAAAGTCATGGATATCATACAGAAAGCTACGGGAACGAGCATTCCAAGCTTGGACGTAAGGTTCTGTTTGATGTTGTGAATGAGTGCCTCGTCTTGAGATGCAGGCAAGCATTTGTTGGAAGTTTTCATGCTTGGACGAGATGGGTGACATTAGTTGAAAACAAGGATACGTTGGCTGAAGACTTGTACAGAGAGATGTTAGGTTGGACAAGCATGGGAGAGTTGATGGTTGATGAGCTTGTTGGGAAGGACATGAGCACTCGTTATGGAAGGTGGCTCCATTTTGGTGCTGAAGAATCCGAGGAAGGTGTTGAGATGGAGTGGACCTTATGGAATTCTTTGGTTGATGAATTGATTTCTGACTTCTTGCAGTTTTAA 2649 0.4171 MEVEKRRSRGSFLSLFIWSGKSRKKLFGNDSELSGELMKGTQNAENILKSQLSGLPIELDENIASSSNMGCSDYNCESSTNSDGGRETRGPGVVARLMGLDSLPSSSSSELASSASFDSPPLRSSHHYDRNAYDVLSDYRSVDHINLRSKLEKSWNTLELRQKVQKRPIERFQTEILPPRSAKSIPITHHKLLSPIKSPAFICTNNAAHVMEAAAKIMEGSPRAYNVNKTPSIGSSSVPLRIMDLKEKLEATHHASVIDRKVRPNTSSDTKGKPTDKSYSKSKLVQSSKGTGDSESSNHSRTKGKVVSLAIQAKKNVQSREILVSCSNRNIVNRKEQNVKLNQCSRSQQVVQHTVQQKTSTSKTHNVLVYNSQKQNADTVKGKSAPKLPASKQPTRRTRSLKVSTGENESSSKAFIQSKSGPTRFSTSVTDDQKPLSLSKTKSTSQKKRSTRRDILLKETIVDNVQIHFDERSIKCNITTDGSKNHHSDDMKQSMDIVSFTFTSPLRSHSTTQVMEIKNSFEIDSFRGDDRPHPQALSLSSSELHMIDGGALSSILDKKLQELTFMIQSSQCNLIQEGPSAISTSASCDSAPILPGTTSKEDGKFQLDPDGETLDGPFEGCCSSSDNSVLYLNLHLQGTESTEESYSSHSKIVEIRNEVDSLYSRQGSRAVSYFQQLNDCLAQKVDLELSESSSSTLTRNMSIGCVSRTCSATDFKRSNDWELEYIRDMLDQLELTGEDFMLGQAYKLLTPSLYDMLESHGYHTESYGNEHSKLGRKVLFDVVNECLVLRCRQAFVGSFHAWTRWVTLVENKDTLAEDLYREMLGWTSMGELMVDELVGKDMSTRYGRWLHFGAEESEEGVEMEWTLWNSLVDELISDFLQF* 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00175 882 MobiDBLite consensus disorder prediction 268 305 - -
Pte13g00175 882 MobiDBLite consensus disorder prediction 105 121 - -
Pte13g00175 882 MobiDBLite consensus disorder prediction 391 444 - -
Pte13g00175 882 Pfam Domain of unknown function (DUF4378) 722 874 IPR025486 -
Pte13g00175 882 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 2 878 - -
Pte13g00175 882 MobiDBLite consensus disorder prediction 374 451 - -
Pte13g00175 882 MobiDBLite consensus disorder prediction 105 124 - -
Pte13g00175 882 Pfam DUF761-associated sequence motif 78 109 IPR032795 -
Pte13g00175 882 MobiDBLite consensus disorder prediction 255 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00175 Pte-Chr13 1298184 1302363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00175 3 880 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 34.710 5.49e-110 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00175 - - qsa:O6P43_007439 711.835