Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00161 CAGAGAAGGAGATTAAAAGGTTGGTTTTTTTATCACGCAGCCTTAAGGAGGTATGAAGCTGCTAGATGGTTGAGAAAGATGGTGGGTGTTGTCGTAGGAAAAGACTTACCAGCTGAACCTTCTGAAGAAGAATTCAGGCTTGGATTGCGTAGTGGGATAATTCTATGCAATGTTTTGAACAATATACGACCCGGATCAGTGCAAAGGGTAGTTGAAGGTCCTTGTAATACTGTTATTATTCCTGATGGAGCAGCTTTATCAGCATACCAGTATTTTGAAAACGTTAGAAATTTTCTTGTAGCTGTCGAGGAAATGGGCGTTCCAACCTTTGAGGCCTCTGATTTAGAGCAGGGAGGCAAATCTGCCAGGGTTGTGAACTGTGTTCTAGCACTGAAATCTTACAGTGAATGGAAAGAAGGCGGCAAAATTGCGCAATGGAAATATAGCGGGAATTCAAAACTGCCAACTGGCGGGAAACCATTTGCTCGGAAATCCTCAGAACCATTCGCGAATTCCATTTCCAGAAGTTTGTCATTAGGCGATAGGTCAATATATGCATGCTACGTACTAGCAAATATGAAGTTTTTCCCCTTCCTAGATGGCAGCGTAGTTGATGAACTTCATTGCTGTTTGACATGCATTATTCTCCAGGAACTGAAAGATGTCCTTCACCAAACAAGAACAGGAATGCAATATTTGCAAATGAAATACAAGGAAGAGATGGGAAATCTAGGTACAATGCAATTAATTCTGTCCCTTGGTATTCAGAATCGATTAATCATACATGTACTCTATATCATGATGCCTGAATGCTTGATGATAGGTAAGCACATGCAAGTTTTGTCTCATGCTGCCTCGCGGTACAAGAAAGTTCTTGAAGAAAATCGCAAGTTGTACAATCAAATACAGGATTTGAAAGGAAATATACGGGTATATTGCCGGGTGCGTCCCTTCTTGCCTGGCCAACCAAACCACATGAGCATCATCAATCACGTGGAGGAAGGAAATATCACAATTAACACTCCTTCAAAAAATGGTAAAGAGGGACAGAAATCATTTACTTTCAATAGAGCATTTAGCCCTTCTGCGTCGCAAGAGGAAGTTTTCACAGATACCCAGCCTCTAGTCCGGTCAGTTCTTGATGGCTACAATGTCTGCATATTTGCTTATGGCCAAACAGGGTCAGGGAAAACTTTTACCATGACCGGACCAGATGATCTAACCGAGGAAAGCTCAGGGGTGAACTACAGGGCATTGAGAGACCTATTTCTTCTCTCAGAGCAGAGGAAAGACACCATGTGCTATGTAATATCTGTGCAGATGCTTGAAATTTATAATGAGCAAGTTAGAGATCTCCTTGCAACGGATGAAATTCGAAACAGTGCTCAAAATGGGATGAATGTACCAGATGCAAACCTAGTACCTGTTTCGTCGACAGCTGATGTCATAAATCTGATGAACCTTGGACACCGAAACCGGGCAGTGAGTGCGACTGCAATGAATGATAGGAGTAGTCGCTCCCATAGTTGCCTGACAGTACATGTTCAAGGCAGAGACTTCACTTCAGGAGTTATTGTGCGCAGTTCTATGCATCTTGTTGACTTGGCAGGAAGCGAAAGGGTCGACAAATCTGAAGTCACAGGAGACAGATTGAAGGAAGCACAACATATCAACAAATCACTTTCTGCTTTAGGAGATGTTATATCTTCTCTAGCTTCAAAGAATGCACATGTTCCATACAGAAACAGTAAACTCACGCAGCTGCTTCAAGATTCACTCGGAGGACAGGCTAAGACACTCATGTTTGTTTGTATTAGTCCGGAGCCTGAAGCTCTTCCCGAAACTTTAAGTACACTGAAATTTGCCGAAAGAGTTTCCACTATTGAACTTGGTGCTGCAAGAGTTAATAAAGAGAGCCCAGACGTAAAAGAGCTTAAAGAACAGGTC 1947 0.4237 QRRRLKGWFFYHAALRRYEAARWLRKMVGVVVGKDLPAEPSEEEFRLGLRSGIILCNVLNNIRPGSVQRVVEGPCNTVIIPDGAALSAYQYFENVRNFLVAVEEMGVPTFEASDLEQGGKSARVVNCVLALKSYSEWKEGGKIAQWKYSGNSKLPTGGKPFARKSSEPFANSISRSLSLGDRSIYACYVLANMKFFPFLDGSVVDELHCCLTCIILQELKDVLHQTRTGMQYLQMKYKEEMGNLGTMQLILSLGIQNRLIIHVLYIMMPECLMIGKHMQVLSHAASRYKKVLEENRKLYNQIQDLKGNIRVYCRVRPFLPGQPNHMSIINHVEEGNITINTPSKNGKEGQKSFTFNRAFSPSASQEEVFTDTQPLVRSVLDGYNVCIFAYGQTGSGKTFTMTGPDDLTEESSGVNYRALRDLFLLSEQRKDTMCYVISVQMLEIYNEQVRDLLATDEIRNSAQNGMNVPDANLVPVSSTADVINLMNLGHRNRAVSATAMNDRSSRSHSCLTVHVQGRDFTSGVIVRSSMHLVDLAGSERVDKSEVTGDRLKEAQHINKSLSALGDVISSLASKNAHVPYRNSKLTQLLQDSLGGQAKTLMFVCISPEPEALPETLSTLKFAERVSTIELGAARVNKESPDVKELKEQV 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00161 649 Pfam Kinesin motor domain 314 628 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte13g00161 649 Gene3D Kinesin motor domain 269 630 IPR036961 -
Pte13g00161 649 Gene3D - 13 152 IPR036872 -
Pte13g00161 649 FunFam Kinesin-like protein KIN-14I isoform A 303 649 - -
Pte13g00161 649 Pfam Calponin homology (CH) domain 16 136 IPR001715 GO:0005515
Pte13g00161 649 SMART ch_5 16 134 IPR001715 GO:0005515
Pte13g00161 649 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 273 628 IPR027417 -
Pte13g00161 649 Coils Coil 288 308 - -
Pte13g00161 649 ProSiteProfiles Calponin homology (CH) domain profile. 14 136 IPR001715 GO:0005515
Pte13g00161 649 ProSitePatterns Kinesin motor domain signature. 528 539 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pte13g00161 649 PANTHER KINESIN-LIKE PROTEIN KLP-3 216 647 IPR027640 GO:0003777|GO:0007018
Pte13g00161 649 ProSiteProfiles Kinesin motor domain profile. 308 628 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte13g00161 649 SUPERFAMILY Calponin-homology domain, CH-domain 18 150 IPR036872 -
Pte13g00161 649 PRINTS Kinesin heavy chain signature 529 547 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte13g00161 649 PRINTS Kinesin heavy chain signature 498 515 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte13g00161 649 PRINTS Kinesin heavy chain signature 382 403 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte13g00161 649 PRINTS Kinesin heavy chain signature 578 599 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte13g00161 649 SMART kinesin_4 306 636 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte13g00161 649 CDD CH_AtKIN14-like 16 133 - -
Pte13g00161 649 CDD KISc_C_terminal 306 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00161 Pte-Chr13 1221159 1225140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00161 296 628 Calmodulin-binding Proteins AT5G65930 43.860 1.14e-79 273