Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00159 ATGAGTCACACTCGGTTATCAAGGATGCGGCCCCCTCTTGTTCCACTTGCCACTCTAATTGGCCGTGAACTTAGGAATGATAAGGTTGAGAAACCTTTTGTTAAGTATGGGCAGGCCGGTTTGGCAAAAAAGGGGGAGGATTATTTTCTGATAAAGACAGACTGCCAAAGGATTCCTGGCGATTCGTCGACATTTTTTTCTGTCTTTGCGATTTTTGATGGGCATAATGGCATATCTGCTGCTATTTTTGCTAAGGAGAACTTATTGACCAATGTCATGAGTGCTATACCCCAAGGAATCAGTAGCGAGGAATGGCTTCAAGCTCTTCCCCGGGCACTAGTTGTGGGTTTTGTGAAAACTGACATAGAATTCCAGCAGAAAGGAGAAACGTCAGGAACCACCGCTACTTTAGTTGTGATTGATGGTTGGACTGTGACTGTTGCATCTGTTGGGGATTCACGCTGCATACTGGATACACAGGGAGGTGTTGTTTCTCTGCTAACGGTTGATCATAGACTGGAAGAGAATGAGGAAGAGAGACAGCGTGTCACTGCCAGTGGTGGTGAAGTTGGAAGACTAAATGTCTATGGAGGCAATGGGGTTGGACCACTCCGATGCTGGCCTGGTGGTCTATGCCTATCTAGATCAATCGGTGACACAGATGTGGGAGAATATATCGTTCCCATTCCACATGTTAAGCAAGTCAAGCTTTCAAATGCTGGTGGACGGCTTATCATCGCCTCAGATGGCATTTGGGATGCATTATCTTCTGATATGGCTGCCAAGTCTTGTCGGGGGCTACCTGCTGAGCTTGCGGCAAAGCTTGTCGTAAAGGAGGCTCTGAGGTCGAGGGGTCTCAAGGATGACACAACGTGCCTTGTTGTAGATATAATCCCTGCAGACCTTCCAGTACTGCCACCGATGCCGAGAAAAAAACAAAATATGCTAGCTTCACTCCTATGTGGGGGAAAATATCAGAATCCTGCTAATAAATCTTCTAAACTCTCTGCGGTAGGTGTCGTTGAGGAGTTGTTTGAAGAAGGCTCGGCAATGCTTGCAGAAAGGCTCGGGAAAGATTTTCCTTTAAACGCCAACTCTGGCATGTGCCGTTGTGCAGTCTGCCAAGTAGATCAAGTACCCAGTGATGGCTTGTCATTGCATTCAGGACCTTTCTTCTCACCAACATCTAAGCTTCGGGAGGAAGGTCCATTCCTCTGCACTAATTGTCGGAAAAAGAAAGATGCTATGGAAGGAAAAAGACCTTTCAATCCCACTGTGACAGCGTAG 1287 0.4678 MSHTRLSRMRPPLVPLATLIGRELRNDKVEKPFVKYGQAGLAKKGEDYFLIKTDCQRIPGDSSTFFSVFAIFDGHNGISAAIFAKENLLTNVMSAIPQGISSEEWLQALPRALVVGFVKTDIEFQQKGETSGTTATLVVIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENEEERQRVTASGGEVGRLNVYGGNGVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPADLPVLPPMPRKKQNMLASLLCGGKYQNPANKSSKLSAVGVVEELFEEGSAMLAERLGKDFPLNANSGMCRCAVCQVDQVPSDGLSLHSGPFFSPTSKLREEGPFLCTNCRKKKDAMEGKRPFNPTVTA* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00159 428 Pfam Protein phosphatase 2C 66 280 IPR001932 -
Pte13g00159 428 ProSiteProfiles PPM-type phosphatase domain profile. 32 297 IPR001932 -
Pte13g00159 428 PANTHER PROTEIN PHOSPHATASE 46 296 IPR015655 GO:0004722|GO:0006470
Pte13g00159 428 SUPERFAMILY PP2C-like 38 297 IPR036457 -
Pte13g00159 428 Gene3D - 33 300 IPR036457 -
Pte13g00159 428 SMART PP2C_4 23 295 IPR001932 -
Pte13g00159 428 CDD PP2Cc 43 297 IPR001932 -
Pte13g00159 428 SMART PP2C_SIG_2 51 297 IPR001932 -
Pte13g00159 428 FunFam probable protein phosphatase 2C 5 35 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00159 Pte-Chr13 1213124 1215674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00159 1 429 PP2C-type Phosphatase Gene Family AT1G09160 75.581 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00159 - - qsa:O6P43_007451 733.021