Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00154 ATGGCTACCGGGGTTAATAATAATGATTCAAAGAGAAACAAGAGAATAGCCATTATTGCTGTCTCTTCCTTCTTGCTAGTGGGCATGGTGGTTGTTATCACCTTCAGTGTTACCCTCGTCCCCAAGAAGAACTTCGGGGAACATAAAGATAATAAAAAGGCCAATGAGATTGCAGCATCCATGAAAGCAGTCAAGACCATTTGCCGTAACACAGAATTCAAAAAGGAGTGCATTAACAGCGTAAACCAAGAGGCTGGTGTCTCCTCTGACCCTAAGGTGTTAATTCAAGCTGCATTCAAAGCAGCAATGAAGAAAATCAAGAAGGGAGCTAAGAAATCAGACACGATCCAAAAGCTCGAGAAGGACCCCAGAACCAAGATGGCCATTGATCAATGCAAGGAGCTTGCAGCAATGTCCATTTCGGAGCTCCAGCGTTCTTCTGAGAAAATATCTGAGTTGGACATACAGGAAGTCGACAAAGCTCTACTCGATTTGAAGACGTGGCTCAGCGCTGCGTACACATACCAAGAAACTTGCCTTGATGGATTCGAGGACACAACTGGCGATGCTGCTGGGAAAATGAAGAAGGCGTTGAAATCAGCCATGCATCTAACGAGCAATGGCATTACCATTGTCTCCCAAATGCATAAAGCTCTGGCAGATTTCAGCTTAAGCGGCATTGTTGGCCGCCGTCTCCTTGCAGATGAAGATGATGACGAACATGGAGTACCGATTCTTGCACATAACGAAATGCCTGATGACTGGAGGGTTGATCCTAAAGTAAGGAAACTCCTCCAAGCTCAATCTTCATCAAATGTAAGCGAGCAGGTTGATGCTGTTGTAGCCAAGGATGGTAGTGGAAATTTCACAACCATCAACGAAGCTCTAAAAGCAATCCCCAAAAAACGAAACCCTGACAAAACCTTTGTCATTTACATCAAGGAGGGTGTTTACCTCGAGCAGGTTAACATTTCGTCCCGCATGGCAAACTTGATGTTCATTGGTGATGGACCTCTCAAGACCCGTATCACAGGCAGCAAGCACTTTAAGCAAAACATCACCACCTTCCGTACAGCCACTGTCGATTCTGTACACGAAGGTGTGAGTGCAGATAATTTTATTGCAAAGAATATTGGGTTCGAGAACACTGCAGGTCCTGAAAACCATCAAGCAGTTGCACTGAGGGTTACATCCGACATGGCTATCTTCTACAACTGCGCCATGGATGGACACCAAGACACCCTTTATGCACATGCCAAGCGCCAATTCTACAGGGACTGCACCGTTTCCGGTACCATTGACTTCGTTTTTGGCAATGCCCTTGCTGTCCTCCAGAACTGCACTTTCGTGGTACGCAAGCCATTGGACAACCAAGCTTGCATTGTGACTGCACAAGGCAGGGAGAAGGCGGACGAGCCAACTGCTCTGGTTGTACAGGGTTGCAGAATCGTAGCTGACCCTGCTTACCAGCCCGTTAAGTCCAAGAACAAGGCCTACCTGGGCAGACCATGGAAAGAGTACTCTAGGACCATCATTATGAACAGCTTCGTCGATGATTTGATTGCCCCTGAAGGCTATTTGCCATGGAATGGTGAATTTGCACTAAAAACCCTAGTGTACGGAGAGTACAATAACTACGGCCCTGGTGCAGACAAATCCAAACGTGTTGAGTGGCCCGGAATACTGAAGACCGTCACATCCAAACTGGCTGAGAGTTTTGCACCAGCAAATTATCTTCTGGGTGATGATTGGATTAAGGCTGCAGGAGTGCCTTATGATCCATCATTATCTTCATATCCAAACAATATATGA 1812 0.4625 MATGVNNNDSKRNKRIAIIAVSSFLLVGMVVVITFSVTLVPKKNFGEHKDNKKANEIAASMKAVKTICRNTEFKKECINSVNQEAGVSSDPKVLIQAAFKAAMKKIKKGAKKSDTIQKLEKDPRTKMAIDQCKELAAMSISELQRSSEKISELDIQEVDKALLDLKTWLSAAYTYQETCLDGFEDTTGDAAGKMKKALKSAMHLTSNGITIVSQMHKALADFSLSGIVGRRLLADEDDDEHGVPILAHNEMPDDWRVDPKVRKLLQAQSSSNVSEQVDAVVAKDGSGNFTTINEALKAIPKKRNPDKTFVIYIKEGVYLEQVNISSRMANLMFIGDGPLKTRITGSKHFKQNITTFRTATVDSVHEGVSADNFIAKNIGFENTAGPENHQAVALRVTSDMAIFYNCAMDGHQDTLYAHAKRQFYRDCTVSGTIDFVFGNALAVLQNCTFVVRKPLDNQACIVTAQGREKADEPTALVVQGCRIVADPAYQPVKSKNKAYLGRPWKEYSRTIIMNSFVDDLIAPEGYLPWNGEFALKTLVYGEYNNYGPGADKSKRVEWPGILKTVTSKLAESFAPANYLLGDDWIKAAGVPYDPSLSSYPNNI* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00154 603 FunFam Pectinesterase 60 216 - -
Pte13g00154 603 Gene3D Invertase/pectin methylesterase inhibitor family protein 58 217 IPR035513 -
Pte13g00154 603 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 62 216 IPR035513 -
Pte13g00154 603 SMART PMEI_2 59 211 IPR006501 GO:0004857
Pte13g00154 603 Gene3D - 273 596 IPR012334 -
Pte13g00154 603 NCBIfam pectinesterase inhibitor domain 58 216 IPR006501 GO:0004857
Pte13g00154 603 PANTHER PECTINESTERASE 23 586 - -
Pte13g00154 603 SUPERFAMILY Pectin lyase-like 277 593 IPR011050 -
Pte13g00154 603 FunFam Pectinesterase 272 596 - -
Pte13g00154 603 ProSitePatterns Pectinesterase signature 2. 429 438 IPR033131 -
Pte13g00154 603 CDD PMEI-like_3 66 217 - -
Pte13g00154 603 Pfam Plant invertase/pectin methylesterase inhibitor 63 209 IPR006501 GO:0004857
Pte13g00154 603 Pfam Pectinesterase 278 582 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00154 Pte-Chr13 1183870 1185756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00154 7 596 Carbohydrate Esterase AT3G05610 50.592 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00154 K01051 - qsa:O6P43_011075 664.455