Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00148 ATGGAGGGAATGATGGATAAGGGAGTACTGGATGATATTATACGAAGGCTTCTAGAAGGGAAAGGAGGAAAGCAGGTTCAGCTTTACGAAGCAGAGATCCGTCAACTCTGCGTCAACGCCCGCCAAACCCTCCTATCTCAACCAAATCTTCTTGAAATCCGTGCTCCAGTTCGCATATGTGGTGACATACATGGACAGTACCGGGACTTACTGAGGTTGTTTGAACGTGGCAGCTACCCTCCTGCTGCAAACTACTTGTTCCTAGGTGATTACGTAGATAGAGGGAAGCAAAGTCTGGAGACAATATGTTTGTTATTGGCCTACAAAATCAGATATCCTGACAAAATTTATCTCTTGAGAGGAAACCATGAGGATGCAAAGATAAACAGGATTTACGGTTTCTATGATGAATGTAAGAGGAGGTTTAATGTTAGGCTATGGAAGATATTCACCGATTGTTTCAATTGCTTGCCTGTAGCAGCACTCATTGACGACAAGATTCTTTGTATGCATGGAGGTCTCTCGCCTGAGTTGGAAAATTTGGATCAGATAAGAGAAATTTCAAGACCTACCGAGATTCCAGACAATGGTCTGCTGTGCGATCTGTTGTGGTCTGATCCTGATAACAGTGTTGAAGGGTGGGCAGAGAGTGACAGAGGCGTTTCAAGTACTTTCGGACCTGACGTAGTTGCAGATTTCTTGGATAAAAATGATCTTGATCTCATTTGCCGAGGCCATCAGGTGGTGGAGGATGGGTATGAATTCTTTGCAAAACGAAGACTGGTGACAATATTTTCTGCTCCAAACTACGGTGGGGATTTTGATAATGTCGGTGCCTTGTTGAGTGTTGATGAGTCTCTTGTGTGTTCCTTTGAAATATTGAAACCAATTGACGTTAAAGCGTCAACAAGTTCTTCGAGGGTGACCCTTAAGAAGCCTCCCAAATCTCGAAAGACCTGA 960 0.4375 MEGMMDKGVLDDIIRRLLEGKGGKQVQLYEAEIRQLCVNARQTLLSQPNLLEIRAPVRICGDIHGQYRDLLRLFERGSYPPAANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIYLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPELENLDQIREISRPTEIPDNGLLCDLLWSDPDNSVEGWAESDRGVSSTFGPDVVADFLDKNDLDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGDFDNVGALLSVDESLVCSFEILKPIDVKASTSSSRVTLKKPPKSRKT* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00148 319 Gene3D - 4 306 IPR029052 -
Pte13g00148 319 CDD MPP_PP1_PPKL 9 296 - -
Pte13g00148 319 Pfam Calcineurin-like phosphoesterase 57 248 IPR004843 GO:0016787
Pte13g00148 319 PRINTS Serine/threonine phosphatase family signature 260 276 IPR006186 GO:0016787
Pte13g00148 319 PRINTS Serine/threonine phosphatase family signature 152 178 IPR006186 GO:0016787
Pte13g00148 319 PRINTS Serine/threonine phosphatase family signature 118 142 IPR006186 GO:0016787
Pte13g00148 319 PRINTS Serine/threonine phosphatase family signature 238 258 IPR006186 GO:0016787
Pte13g00148 319 PRINTS Serine/threonine phosphatase family signature 56 83 IPR006186 GO:0016787
Pte13g00148 319 PRINTS Serine/threonine phosphatase family signature 85 112 IPR006186 GO:0016787
Pte13g00148 319 PRINTS Serine/threonine phosphatase family signature 181 208 IPR006186 GO:0016787
Pte13g00148 319 Pfam Serine-threonine protein phosphatase N-terminal domain 10 53 IPR031675 -
Pte13g00148 319 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 14 306 - -
Pte13g00148 319 SMART pp2a_7 28 298 IPR006186 GO:0016787
Pte13g00148 319 FunFam Serine/threonine-protein phosphatase 2 306 - -
Pte13g00148 319 SUPERFAMILY Metallo-dependent phosphatases 16 299 IPR029052 -
Pte13g00148 319 ProSitePatterns Serine/threonine specific protein phosphatases signature. 119 124 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00148 Pte-Chr13 1155603 1157659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00148 35 241 Calmodulin-binding Proteins AT5G63870 31.984 7.17e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00148 K06269 - gmx:100805030 586.26