Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00141 ATGGACAATGCTTCTGGGATTTTCCGCATGACCTTCATCATCTTCACGCTTTTTGCATCGCTCTGTAATTCTAGACACTTCACAAATGCAGAATCTTTGTTGAGTGAGGCAGAGGATTTCCACCTTCAACGCCTGCAACATATGTACATGAAGTATTTAAGAGAGGAGCGTAGAGAAAATGTTGAAAATAATATTCACAAATTATCAGGCTTAGATGGGAGTCGGCAAGAGGAAGGTTCTATAGTGAAAAAGTTTAGAGCTTTGCTTGGGTTGAGAAGTGTTCTCTTCGGAAGATCATTTCATGGAGAGTTCGACAATTTGGCACCTGCACCTTCCCCTTCTTCCCACGTCGAAGCATATGTACCATCTCTACCTCCAGCTTCAGCTCCTGTTGCCGTACTGCACACCCACAGACACCGTCATTCTTCACCACATCATAGACATTGGAGTCCACCCCCTCATAAGAGTACTCAGCTTGAAGATAAAGGCAGAACTAAATATGTAATTGCAGCCGTTGTTGTGCCTACTGGAATTGCTTTATCAATCTGTGCATTTGGCATTATCTGGTTTTGCAAGAAAATCCAGAAGCAAAGAAAGAAACATGAAAGGCCAATGCCAATTTATCACAGGAAGGTAGGAACCGAGAGCAGATCAAATTTTGTGAATACACAAAACCCTAAGAACAAGGTGAGTGCAAACTTTGACCTAGATCTAATCTCTCTTACTTCACTTGGCTTGAATACCGAGCAAAATGCTTCTAGCCTAAAAGAAGTTTCGCAAAATGTCAATTACATATCAAACAATACGAACCCAGAAGTTTTATTTCACGAAAGGAAAGAACTTACTAATAGGGAAGTAGCGAATTCAGAATCTGAAAATGTAAGTGGTTCTTGTGCAAAAGAAATCGCAGATGATAGTGAACATGTTGAACCAATTAAGTATGATATTGATGATTGTAACTCTGCATATGGCGATCATATTATCCCTTTTGAATCTAATGCGTCGGATGACGAATCTTTTCATTCCTTTGGTGAATCAAATTCATCAAACCTTCGACTTTCCAATGCTTCAGCGGGAAGTCTGAACGAAACATCACACTTGTCCCCAGAAATGTTGCAGTCGGTTTATCCGCTGGACAATTCACAAAATTCACTTCACCAAACACATACAACCTCTCCTCCATGTGATTCCACTCAGGTGCAGGGCACGTCAGAAAGTTCTATGGCCTGTGGAGAGTGCCTTACACCTCCTCCACCACCTCCACCTCCACCTCCGCTTCATTCAGTCACACATTTCTCCTATCCTTCTGCTAGAGCCACAACCAAGTCCATTTCTCATTCTGCATCATCTAATAATCATTTGTCTACCAAAAGTTCGGAATCAACTCACAGTGCACCGGATGTGTTGCCACATTCACATCCCCATAGTCCTAAAAAGGGGTCACGTGGCATTCCGGCACCACCGTGTCCACCTCCTCCGATTCTAAAGGGAAACATTAATCCTTTGAAAACACCACCACCACCTCCTCCATCTCAATTTCCTCAGTTTACGACAGTAGGCAAAGAAGGAGCTCTACTACCCAAACTGAAACCACTTCACTGGGACAAAGTTAGAGCAGCGCCAGATCGCTCCACAGTATGGGACAAGCTGCGGTCAAGCTCATTTGAGTAA 1671 0.4297 MDNASGIFRMTFIIFTLFASLCNSRHFTNAESLLSEAEDFHLQRLQHMYMKYLREERRENVENNIHKLSGLDGSRQEEGSIVKKFRALLGLRSVLFGRSFHGEFDNLAPAPSPSSHVEAYVPSLPPASAPVAVLHTHRHRHSSPHHRHWSPPPHKSTQLEDKGRTKYVIAAVVVPTGIALSICAFGIIWFCKKIQKQRKKHERPMPIYHRKVGTESRSNFVNTQNPKNKVSANFDLDLISLTSLGLNTEQNASSLKEVSQNVNYISNNTNPEVLFHERKELTNREVANSESENVSGSCAKEIADDSEHVEPIKYDIDDCNSAYGDHIIPFESNASDDESFHSFGESNSSNLRLSNASAGSLNETSHLSPEMLQSVYPLDNSQNSLHQTHTTSPPCDSTQVQGTSESSMACGECLTPPPPPPPPPPLHSVTHFSYPSARATTKSISHSASSNNHLSTKSSESTHSAPDVLPHSHPHSPKKGSRGIPAPPCPPPPILKGNINPLKTPPPPPPSQFPQFTTVGKEGALLPKLKPLHWDKVRAAPDRSTVWDKLRSSSFE* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00141 556 MobiDBLite consensus disorder prediction 413 429 - -
Pte13g00141 556 MobiDBLite consensus disorder prediction 481 514 - -
Pte13g00141 556 PANTHER FORMIN-RELATED 442 556 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pte13g00141 556 ProSiteProfiles Formin homology-2 (FH2) domain profile. 519 556 IPR015425 -
Pte13g00141 556 MobiDBLite consensus disorder prediction 381 524 - -
Pte13g00141 556 MobiDBLite consensus disorder prediction 141 160 - -
Pte13g00141 556 MobiDBLite consensus disorder prediction 381 410 - -
Pte13g00141 556 MobiDBLite consensus disorder prediction 433 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00141 Pte-Chr13 1105536 1107206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00141 503 556 FH2 protein (formin) Gene Family AT3G05470 70.370 5.83e-18 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00141 - - qsu:112030660 342.813