Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00140 ATGGAAAAAATAAAACCAGGGGAGGGTCTGTCTTTGCAACAATTAGAGGCTCTTTCAAAAATGATCCCTACGGAGGATGAAGAAGCAAAGCTCTCAAACTATGATGGAAACCCCGACGATCTTGGATCTGCAGAAAGGGAAACCTTCGATGATGAGGTGGTTCACTTGAGGAACTCATTCCTAATGTTGGAGGAGGCATGCAAAGAACTAAGATCGAGCAGGCTATTCTTGAAATTACTGGAAACTGTGCTCAAAACAGGAAACCGTATGAATGTTGGTACTATCAGAGGAGGTGCCAAAGCATTTAAGCTTGATGCCCTTCTCAAGCTAGCTGATGTGAAGGGAACCGATGGGAAAACCACCTTACTTCATTTTGTTGTGCAAGAGATTGTTCGATCAGAAGGGATCAGAGTTTCGGACAGTATCATGGGGAGAATAAATCAGAGAAACAAAAACAGAACTGAGGAAGAGAAGGAAGAAGATTACAAAAGAATGGGCCTCGAACTTGTTTCAGGTCTTAGTACTGAACTACACAACGTTAAGAAGACAGCTTCCATCGACTTGGATGTTCTTGCAGGTTCTGTCACAAACTTAACTGATGGAATGACTAGGTTGCAACATCTAGTACTAGAAGAGCTACGTGAAGAGGATGACAAAAATGGTAAAAGCAGTTTTGTCAGCTCAATGAAGTCCTTCCTGTTTTACGCAAGCAAGAATCTAAAGGAGCTACAAGGAGATGAAGAGAGGGTGTTATCACTTGTGAAAGAAATTACTGAATACTTTCATGGAAATGTGAGCAAAGAAGAAGCAAATCCACTTCGGATATTTGTCATTGTAAGAGACTTCCTTGGAATGCTAGATAATGTTTGTAAAGAACTGAGAAGGTCCAGTGTCCCGCGAAGTCCAAACCCTCTTGCCCTACTCAGATAG 930 0.4183 MEKIKPGEGLSLQQLEALSKMIPTEDEEAKLSNYDGNPDDLGSAERETFDDEVVHLRNSFLMLEEACKELRSSRLFLKLLETVLKTGNRMNVGTIRGGAKAFKLDALLKLADVKGTDGKTTLLHFVVQEIVRSEGIRVSDSIMGRINQRNKNRTEEEKEEDYKRMGLELVSGLSTELHNVKKTASIDLDVLAGSVTNLTDGMTRLQHLVLEELREEDDKNGKSSFVSSMKSFLFYASKNLKELQGDEERVLSLVKEITEYFHGNVSKEEANPLRIFVIVRDFLGMLDNVCKELRRSSVPRSPNPLALLR* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00140 309 Gene3D Formin, FH2 domain 48 299 IPR042201 -
Pte13g00140 309 SMART it6_source 2 301 IPR015425 -
Pte13g00140 309 Pfam Formin Homology 2 Domain 47 286 IPR015425 -
Pte13g00140 309 Gene3D - 4 47 - -
Pte13g00140 309 SUPERFAMILY Formin homology 2 domain (FH2 domain) 9 295 - -
Pte13g00140 309 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 309 IPR015425 -
Pte13g00140 309 PANTHER FORMIN-RELATED 4 297 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00140 Pte-Chr13 1103720 1104829 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00140 7 310 FH2 protein (formin) Gene Family AT3G05470 69.113 5.47e-143 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00140 - - gmx:100793761 436.417