Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00138 ATGGCTGATTTCCAATCTTCTACCCACCGATCCAAATGGATATTCACTCCTGAACAACTGGATACTAAACGTAGAATTGCTAATGGAAGAGCCAAGCAGCTCCTAGAGAAGTATGGATCAACTCTTATGGAAGTGGATATTGACGGATCCTTGTCCTTTCCCAAAGCCCAAGTTGCTACACAAGATAGTGCTGAGAAGCGTTCACGTCTGAAACCCCTCAGCGTTGACGAAGAGCAATTGATGATGGCTTTCTACCATAGTAAAATACAGGAAGTGTGCAACAACTTCTACTTTCCACCTAAAATACAAGCTGTTGCTCTTATTTACTTCAAAAGGTTTTATCTGCAGTGGTCAATAATGGAGCACCATCCCAAACATATAATGCTGACCTGTATATATGCTGCTTGTAAAATTGAAGATAATCATGTCTCAGCCGAGGAGATTGGTAGAGGGATCTCACAGGATCATCAAATGATTCTCAATAGTGAGATGATCGTTTATCAGAGTCTAGAATTCGATCTTATTGTCTATACTCCATATCGCTCTGTTGATGGTTTTCTGAATGATATAGAGGATTTTTTTCAAGCTGATGATGACAAGATTCAAATGCTGAAGGAAACTGCAAGAATTGAAGTCAAGAAGATCATGGTAACTGACGCTCCCCTCATGTTTCCTCCTGGCCAGTTGGCTTTGGCTGCTTTGCGTAATTCAAATGCACGTTGTCAAGTTATCAACTTTGAGAGTTACTTGAGGAGCCTGCTCTCCCGTCAAAGTTCTGGCCACACTGTCTTTGAGCTCATCACATCCTTGGATGAGATTGATTCTTGTGTAATAGACCCCTTTTCGTTTTTCTTAATAGCATTAGCTATTTATCGCCATTTCTTTAATTTCCCATTCCAATTACATGTTTCATGGTTAGACTGGGATGGTTTTATCGTTCACCCAAGCCTATCTGACCTTGCACATGTGTCAGGTTAG 978 0.408 MADFQSSTHRSKWIFTPEQLDTKRRIANGRAKQLLEKYGSTLMEVDIDGSLSFPKAQVATQDSAEKRSRLKPLSVDEEQLMMAFYHSKIQEVCNNFYFPPKIQAVALIYFKRFYLQWSIMEHHPKHIMLTCIYAACKIEDNHVSAEEIGRGISQDHQMILNSEMIVYQSLEFDLIVYTPYRSVDGFLNDIEDFFQADDDKIQMLKETARIEVKKIMVTDAPLMFPPGQLALAALRNSNARCQVINFESYLRSLLSRQSSGHTVFELITSLDEIDSCVIDPFSFFLIALAIYRHFFNFPFQLHVSWLDWDGFIVHPSLSDLAHVSG* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00138 325 Pfam Cyclin C-terminal domain 179 261 IPR031658 -
Pte13g00138 325 Gene3D - 177 278 - -
Pte13g00138 325 PANTHER CYCLIN 55 240 IPR043198 GO:0006357|GO:0016538
Pte13g00138 325 FunFam Cyclin h 177 279 - -
Pte13g00138 325 CDD CYCLIN_AcCycH_rpt1 3 174 - -
Pte13g00138 325 FunFam cyclin-H1-1 63 175 - -
Pte13g00138 325 SUPERFAMILY Cyclin-like 179 274 IPR036915 -
Pte13g00138 325 SUPERFAMILY Cyclin-like 7 176 IPR036915 -
Pte13g00138 325 Gene3D - 63 175 - -
Pte13g00138 325 Pfam Cyclin, N-terminal domain 84 174 IPR006671 -
Pte13g00138 325 SMART cyclin_7 87 168 IPR013763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00138 1 285 Core Cell Cycle Gene Families AT5G27620 59.722 6.86e-126 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00138 K06634 - qsa:O6P43_013702 405.601