Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00137 ATGGACAGTGACCAGGAGAGATTGTTGCCAATAGCCAACGTGGGTCGGATCATGAAGCAAATTCTTCCTCCTAATGCAAAAATTTCGAAAGAGGCCAAACAAACCATGCAAGAATGTGCGACGGAGTTCATAAGTTTTGTGACAGGTGAGGCAGCTGACAAGTGTCACAAAGAGAACCGAAAGACTGTAAATGGGGACGACATCTGTTGGGCTCTAAGCACTTTAGGTTTTGATGACTACGCTGATGTTGTACTAAGGTACTTACATAAATATAGGGAGGCTGAGAAGGAGAGAGCTAATCACAGTAAAGATAACACTGGTGGATTCCCAGAAAAACATCAAGAATCATCAGACCAACCAAGGAGCCAACTTGAGAAGCAGTCTACTACAATTCCTACTTCATCAGAACACAGAGATCTCTAG 423 0.4326 MDSDQERLLPIANVGRIMKQILPPNAKISKEAKQTMQECATEFISFVTGEAADKCHKENRKTVNGDDICWALSTLGFDDYADVVLRYLHKYREAEKERANHSKDNTGGFPEKHQESSDQPRSQLEKQSTTIPTSSEHRDL* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00137 140 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 72 IPR003958 -
Pte13g00137 140 PRINTS CCAAT-binding transcription factor subunit A signature 36 54 - -
Pte13g00137 140 PRINTS CCAAT-binding transcription factor subunit A signature 74 92 - -
Pte13g00137 140 PRINTS CCAAT-binding transcription factor subunit A signature 55 73 - -
Pte13g00137 140 MobiDBLite consensus disorder prediction 94 120 - -
Pte13g00137 140 SUPERFAMILY Histone-fold 5 118 IPR009072 GO:0046982
Pte13g00137 140 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 3 123 IPR027113 GO:0001228|GO:0006355|GO:0016602
Pte13g00137 140 Gene3D Histone, subunit A 1 136 IPR009072 GO:0046982
Pte13g00137 140 FunFam Nuclear transcription factor Y subunit B-6 1 115 - -
Pte13g00137 140 MobiDBLite consensus disorder prediction 94 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00137 Pte-Chr13 1071909 1072331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00137 3 129 CCAAT-HAP3 Transcription Factor Family AT1G09030 69.291 3.22e-61 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Pte13g00137 CBFD_NFYB_HMF 5.8e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00137 K08065 - tcc:18600451 191.43