Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00131 ATGCAAGACATCATCGGATCAGTTCGTCGGTCGCTTGTGTTTCGAACTACGTCAGACAACAATGGAGAAACTGGATTGGGAACTGGAGCCTTGGTAGAAAAGATCAATTCTTCTATTCGCAAGTCTAGAATCTTCAATAAAACCTTGCCGGCCCCGTCTTTACGTCAAGTGACCAAGGGAGATGCCCTCACGATACGATGGCGAAAGGGTGAGTTGATCGGCTGCGGTGCATTTGGTCAAGTCTATATGGGTATGAATCTCGACTCCGGAGAGCTGTTAGCAGTCAAGCAGGTTCTGATTGCGGTTAATAGTGCGTCAAAGGAGAAGGCGCAGGCACATATCAAAGAACTTGAAGAGGAAGTTAAACTTCTTAAAGATTTATCTCACCAAAACATTGTTGTAAGTGCGCACTCTTTTTTCCCCCTTTTATCAGCAAATCTATCTCTCGCTAGCATTTTGTTCTTTGTCCAGAGATATCTTGGAACAGTGAGGGAAGAGGATACACTTAACATTCTTTTGGAATTTGTTCCTGGGGGATCAATATCATCACTTCTGGGGAAGTTTGGTGCTTTTCCGGAGGCTGTTGTAAGAACGTACACTAAGCAGTTGCTGTTGGGACTGGAGTACTTGCACAAAAATGGAATCATGCATAGAGACATTAAGGGGGCAAATATTCTTGTAGATAATAAAGGCTGTATTAAACTTGCAGATTTTGGGGCGTCCAAGCAAGTAGTTGAGCTGGCCACCATATCTGGCGCCAAGTCTATGAAGGGTACACCATACTGGATGGCTCCTGAAGTCATTCTTCAGACTGGTCACAGCTTCTCTGCTGATATATGGAGTGTTGGGTGTACTGTGATTGAGATGGCCACAGGAAAGCCTCCTTGGAGTCAGCAGTACCAAGAGGTAGCTGCACTTTTCCATATAGGTACAACAAAGTCTCCCCCACCGATTCCTGATCATCTCTCCATTGGAGCAAAAGATTTTCTGATGAAATGTCTGCAGAAGTATGTTCCCTTTTTCTTTGGTTTCTGTATTGGCTTTAGTCATATTGTTGTTTTAAGAGAGAAAGGCAGACCTTTAATTTCGTTAAGAATCCCAGTTCTCCTTCCTTTCCAGTTTCATACGAACTCGATGGATATTTGTAATGGGGGCAGTCTACATTGCCCATCTGTGTGCACAGAGAAACTGTCAGGAAATCAAAACCTTCCGGGAATGAATAGTGATGATGATATGTGTCAACTTGATGACCAAGATGATTTTAAGATGAGTGAAATGAAACCACTCTCTCAGATGTCAGACAATTTCAAGAGTTTCAATCCAATGTCTGAGCTTGCTGATAAATGGGACTGCAATTCTGTAGAGGATGTGGAACTTGCAAAACAAGAAACAAATTTGGATCTTAGTCAAGTATGCCAACCTGATGGTCACACTGGAGTTCATGATGGTCAGCATAAAGATTTTGCATTTCCTCCATCCCTCTCTGAAGACGATGATGAAGTAACCGAATCCAAAATTCAGGCCTTTTTGGATGAGAAGGCTTTAGAACTGAAGAAAATGCAAACTCCTCTCTACGAAGAATTCTATAACAGTATGAGTGGATCTTGCTCTCTCAACCTTGTGGAGAGCTGTAGTGATGAAGCGGCTTCAAAGTTCTTGAAGCTACCTCCAAAAAGCCGGTCGCCCTGTCGAGGTACAGTGGGGATCACATCTAAAGCAGTTGACTGGTTTTCTTCTGTAAGCCCCGTAAGTAACAGCAGGCACTTATCAAAAGTTGGAAATGCAAGTGATCGGAGTTTGCAGGATACTCCATCCCCCCCAATTAACGGGAAAGCAATTCTAATAGATTCTAAGCAACAACAGGGTAGTCCAAGTGTAAGCTTTGCTGAGAGACAGAGGAAGTGGAAAGAAGAGCTCGACCAAGAGCTTCAGAAACAGCGAGAAATGATGCGGCAAGCAGGTGTGGGAGGGAAACCATCCATCACCTAA 1989 0.4359 MQDIIGSVRRSLVFRTTSDNNGETGLGTGALVEKINSSIRKSRIFNKTLPAPSLRQVTKGDALTIRWRKGELIGCGAFGQVYMGMNLDSGELLAVKQVLIAVNSASKEKAQAHIKELEEEVKLLKDLSHQNIVVSAHSFFPLLSANLSLASILFFVQRYLGTVREEDTLNILLEFVPGGSISSLLGKFGAFPEAVVRTYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSPPPIPDHLSIGAKDFLMKCLQKYVPFFFGFCIGFSHIVVLREKGRPLISLRIPVLLPFQFHTNSMDICNGGSLHCPSVCTEKLSGNQNLPGMNSDDDMCQLDDQDDFKMSEMKPLSQMSDNFKSFNPMSELADKWDCNSVEDVELAKQETNLDLSQVCQPDGHTGVHDGQHKDFAFPPSLSEDDDEVTESKIQAFLDEKALELKKMQTPLYEEFYNSMSGSCSLNLVESCSDEAASKFLKLPPKSRSPCRGTVGITSKAVDWFSSVSPVSNSRHLSKVGNASDRSLQDTPSPPINGKAILIDSKQQQGSPSVSFAERQRKWKEELDQELQKQREMMRQAGVGGKPSIT* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00131 662 SUPERFAMILY Protein kinase-like (PK-like) 66 336 IPR011009 -
Pte13g00131 662 CDD STKc_MAPKKK 66 336 - -
Pte13g00131 662 Coils Coil 100 127 - -
Pte13g00131 662 MobiDBLite consensus disorder prediction 476 497 - -
Pte13g00131 662 SMART serkin_6 67 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00131 662 Gene3D Transferase(Phosphotransferase) domain 1 66 338 - -
Pte13g00131 662 MobiDBLite consensus disorder prediction 584 606 - -
Pte13g00131 662 ProSiteProfiles Protein kinase domain profile. 67 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00131 662 MobiDBLite consensus disorder prediction 584 609 - -
Pte13g00131 662 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Pte13g00131 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Pte13g00131 662 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 55 336 - -
Pte13g00131 662 Pfam Protein kinase domain 68 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00131 Pte-Chr13 1013998 1018481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00131 1 659 MAP Kinase Kinase Kinase AT1G54960 53.152 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pte13g00131 Pkinase 1.5e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00131 K20606 - qsa:O6P43_011113 783.097