Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00110 ATGGAAGTTCGGAGTCCCTCTGTTTCTTCAGGGCCCTCTAGCCTTGTCAGTGCAGATAACCACACTTATCATCACTCACAATCACAAACCCATGACCATCCACACCGTGGCCTTCTTTCATCAAATACCGTTCTCATAATCGTCATGACACTTGTCTCCATGGTGATTATATTCGCCATACTTGCCATATTATTCATGCTGCGTAGGCTCAAGATAGCTAAAGAGAATTCCTCCACCAAAGACAACGCTACCGGAAGCAGCAGGTTCGTTGCTCCCACAACATTGAACTTCAATTCTAGTCCAGATATGAGGGGTGGTTGCCTTCATGGGGGAAACTTGAACAGGACAGTACTTACACCCAAGTATAAAGGCGTACAAGTTTTCACGTACAGGGAGCTTGAAGTAGCCACTGACGGATTCAGTGAACGAAATTTAATTGGAAATGGAGGCTTTGGTGTTACTTACAGAGGGGTATTAATTGATGGAGCTGTTGCAGCAATTAAGATGATCCGTGAGCAAGGTAAGCAGGGGGAGCGTGCATTCAGAATCGAGGTGGATCTACTGAGCAGGTTGGAATCACCTTACTTAGTGGAACTGCTAGGTTATTGTGCTGACCAACACCATAGGCTCCTAGTTTATGAATACATGTCCAATGGCACCCTTCATCATCATCTTCACTCTACTCAGACTCAATCACAGACATTGGATTGGGGGAGCAGGTTGAGGATAGCCCTTGATTGCGCCCGGGCCTTGGAATTTCTTCATGAACATGCAACCCCGCCAGTTATCCACCGTGACTTCAAGAGTACCCATGTTCTACTAGACGACAATTTCCGTGCCAAGGTTTCAGACTTTGGACTGGCCAAGATGGGCTCTGAGAAGATCAATGGTCAGATTTCGACACGGGTGTTGGGGACCACTGGATATTTGGCACCAGAGTATGCATCAACTGGGAAGCTCACAACAAAGTCAGATGTATACAGTTATGGAGTGGTTCTTTTGGAGCTACTTACAGGCAGAGTACCCGTGGACAGTAGGCGTCCTCCTGGAGAACATGTTCTTGTATCTTGGGCTCTTCCAAGATTAACAAACAGAGAAAAAGTGGTCGAAATGGTTGATCCAACGCTGAAAAGACAGTATCCCATGAAGGATCTTATTCAGATTGCTGCGATTGCAGCTATGTGCGTGCAGCCAGAAGCAGATTACCGGCCTCTGATGACAGACGTTGTACAATCACTAGTACCTCTGGTTAAAAACTCTTCATGTGGCAGTACCTCCAGTTCTCTCAGATTTCAAATTCAAACACCTGGGCAAAACAAATAA 1323 0.4603 MEVRSPSVSSGPSSLVSADNHTYHHSQSQTHDHPHRGLLSSNTVLIIVMTLVSMVIIFAILAILFMLRRLKIAKENSSTKDNATGSSRFVAPTTLNFNSSPDMRGGCLHGGNLNRTVLTPKYKGVQVFTYRELEVATDGFSERNLIGNGGFGVTYRGVLIDGAVAAIKMIREQGKQGERAFRIEVDLLSRLESPYLVELLGYCADQHHRLLVYEYMSNGTLHHHLHSTQTQSQTLDWGSRLRIALDCARALEFLHEHATPPVIHRDFKSTHVLLDDNFRAKVSDFGLAKMGSEKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDSRRPPGEHVLVSWALPRLTNREKVVEMVDPTLKRQYPMKDLIQIAAIAAMCVQPEADYRPLMTDVVQSLVPLVKNSSCGSTSSSLRFQIQTPGQNK* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00110 440 SUPERFAMILY Protein kinase-like (PK-like) 118 413 IPR011009 -
Pte13g00110 440 PANTHER OS01G0750732 PROTEIN 6 427 - -
Pte13g00110 440 ProSiteProfiles Protein kinase domain profile. 140 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g00110 440 Gene3D Phosphorylase Kinase; domain 1 114 215 - -
Pte13g00110 440 ProSitePatterns Protein kinases ATP-binding region signature. 146 168 IPR017441 GO:0005524
Pte13g00110 440 Gene3D Transferase(Phosphotransferase) domain 1 216 431 - -
Pte13g00110 440 Pfam Protein tyrosine and serine/threonine kinase 144 413 IPR001245 GO:0004672|GO:0006468
Pte13g00110 440 MobiDBLite consensus disorder prediction 1 24 - -
Pte13g00110 440 CDD STKc_IRAK 146 416 - -
Pte13g00110 440 FunFam Receptor-like serine/threonine-protein kinase ALE2 216 429 - -
Pte13g00110 440 FunFam Serine/threonine-protein kinase PBS1 109 215 - -
Pte13g00110 440 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00110 Pte-Chr13 903330 906645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00110 124 438 Receptor kinase-like Gene Family AT3G58690 63.077 1.63e-148 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pte13g00110 PK_Tyr_Ser-Thr 6.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00110 - - qsa:O6P43_007545 607.06