Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00093 ATGGAGTGTAATAAGGATGAGGCTATCAGAGCCAAGCAAATAGCTGAAAAGAAGATGCAAAATAGTGATTTTGTTGGGGCATTGAAGATTGCAAAGAAGGCACAAAATCTCTTCCCTGGTGTAGAAAAAATTGTGCCTATGCTTACCGTCTGTGAGGTTCACGTTGCTGCACAAAACAAGCTTTGCGGGTCGGAGATGGACTGGTATGGGATCCTTCAGACACAGCAATTCGCTGATGATGCTACCATCAGGAAACAGTACAAGAAGCTCGCACTTCTGCTTCACCCAGACAAGAACAACTTTCCTGGTTCAGAGTCTGCTTTCAAGCTAGTTGGGGAAGCAAATAGATTGCTTAATGATCAAAAGAAACGTACTGTATATGACATAAGGTGCAGGGCCTTAATGAGGACAAGCGTGCCTGTCTCACATCAGTCAAATGGCAATCAATTTTTCAAGAGGGATGTTGAGAATGCACAAAAATGTCAGAAATCTTCCTATAGGCCGTCCACTAATTGTAGCTTCAATCAGCAGGCCAAGAACCTGATGTTCTGGGCATCTTGCCGTCATTGTAACTTCAGGTATGAATACTACAGAAGCTTTATAAATGTATTAGTACGTTGTCAAGCATGTTGTAGATATTTCACTGCTTGTGACTTGGGGGCTCAAGGAGGCCCGAAAGCATCTCAAAAAACAGATGTTTCAAAGGATGGGTCTGCGAAAGTGGATTCTCAATCTAAATGTGAAAGAAAAAGAGATTGTAAAGTGCCCAAGGGAAGTTCTGATGCTGTTAATCATAAGCCTGAGAAACGAAGAACTTCAGGTGATGGTAGAAGAAGTGCAAAAGAACCGGTATCTGAAGACAAACATTTTGAGAATCCTCGCAAAAAGCCTCGAGGAAGTGGTTCCTCAAATACTGAAGATGTGGCTGTAGAAGGAGCACGAACCAGCAGTCAATTGCCAAAGGAACACCATTCAGACACATCTGCTGCTGGTTTGAGTGGCAAAAAGGAAGGCACTCAGAGTAGTTCTGAAGGGAGTTTTAATCCAGAGGCAATAGAATTCCCTGATCCAGAGTTCTCTGACTTTATGAAGGATAAATCTCAGGATTCTTTTTGTGTCAATCAAATATGGGCTTTATATGATTCAAAAGATGGTATGCCAAGGTACTATGCTCGCATTCAGAAAGTGCTGTCCCCTGGATTCAGGCTATCAATCACATGGCTAGAGCCGAACCCACAAGATCAGGGAGACATTGATTGGTGTGATAGGGATTTACCTGTAGCTTGTGGCGACTTCAAACTTGGAGACACTGAAGAAACTGCAGATCTTCTTACGTTTTCTCATCAGGTGCTATATGAAAAATGTGGTCGCAGACGTCATTATATGATATATCCTAGGAAGGGGGAGACGTGGGCTATCTTCAGGAACTGGGATATTACATGGAATTGTCCAGAAAAGCACGAATATGACTTCGAATATGTGGAAGTTATCTCAGACTTTGTTAAGGATGTCGGCATTGAAGTTTTGTATCTAAGCAAGGTGAAAGGATTTGTCAGTCTCTTTCAGCCAACTAAGCAGACTGGCGATCAATCATTTCGATTGCCTCCAAATGAGTTGTATAGATTCTCACACCAAATTCCCTCCTTTAGAATGACTGGCGACGAACGAGTAGGTGTACCAAAAGGATCTTTCGAATTTGACCCTCTTGCTTTGCCTGTCAATCTTTTTTATGTAAGTGAAAAACCTGATGACAAGAACAATAAAACAGATACTGAAGAAGTGCGGGTCTCGTTCATATTCTCTGACGGCAAATGGAGAAAGTTTACATGTCAAGAGAATTTACAGTCAAAAGTGGTTCCTGAGAGCTGTGATAAAGGAACCAATTCGTCTGTCCCTGTTGACTCTCAAAGAGAAGGTGCTAATAATATTCAGGTAACAAAGTGCAGATCTACGAAGTCAGAGAATTGTTCGGAGAACCTAAGCCATCAAGGCTTTAATAAACCAGTGGCAACATCGACCTCTCCTCTGGCTGATGAACTGATGCAAACAGCGAATAGACGAGAAAAAAGTTGTGAAAAGAAAGCTTTCGAACTACGAAGATCTCCGAGAGGTCTATGCAGTAAAAACACTTCAGTAAAAGCTAGTTGA 2148 0.4199 MECNKDEAIRAKQIAEKKMQNSDFVGALKIAKKAQNLFPGVEKIVPMLTVCEVHVAAQNKLCGSEMDWYGILQTQQFADDATIRKQYKKLALLLHPDKNNFPGSESAFKLVGEANRLLNDQKKRTVYDIRCRALMRTSVPVSHQSNGNQFFKRDVENAQKCQKSSYRPSTNCSFNQQAKNLMFWASCRHCNFRYEYYRSFINVLVRCQACCRYFTACDLGAQGGPKASQKTDVSKDGSAKVDSQSKCERKRDCKVPKGSSDAVNHKPEKRRTSGDGRRSAKEPVSEDKHFENPRKKPRGSGSSNTEDVAVEGARTSSQLPKEHHSDTSAAGLSGKKEGTQSSSEGSFNPEAIEFPDPEFSDFMKDKSQDSFCVNQIWALYDSKDGMPRYYARIQKVLSPGFRLSITWLEPNPQDQGDIDWCDRDLPVACGDFKLGDTEETADLLTFSHQVLYEKCGRRRHYMIYPRKGETWAIFRNWDITWNCPEKHEYDFEYVEVISDFVKDVGIEVLYLSKVKGFVSLFQPTKQTGDQSFRLPPNELYRFSHQIPSFRMTGDERVGVPKGSFEFDPLALPVNLFYVSEKPDDKNNKTDTEEVRVSFIFSDGKWRKFTCQENLQSKVVPESCDKGTNSSVPVDSQREGANNIQVTKCRSTKSENCSENLSHQGFNKPVATSTSPLADELMQTANRREKSCEKKAFELRRSPRGLCSKNTSVKAS* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00093 715 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Pte13g00093 715 Pfam Domain of unknown function (DUF3444) 349 555 IPR024593 -
Pte13g00093 715 MobiDBLite consensus disorder prediction 297 312 - -
Pte13g00093 715 MobiDBLite consensus disorder prediction 233 296 - -
Pte13g00093 715 Gene3D DnaJ domain 64 179 IPR036869 -
Pte13g00093 715 MobiDBLite consensus disorder prediction 332 348 - -
Pte13g00093 715 MobiDBLite consensus disorder prediction 222 360 - -
Pte13g00093 715 Pfam DnaJ domain 67 128 IPR001623 -
Pte13g00093 715 CDD DnaJ 67 120 IPR001623 -
Pte13g00093 715 PRINTS DnaJ domain signature 69 87 IPR001623 -
Pte13g00093 715 PRINTS DnaJ domain signature 87 102 IPR001623 -
Pte13g00093 715 PRINTS DnaJ domain signature 103 123 IPR001623 -
Pte13g00093 715 SUPERFAMILY Chaperone J-domain 61 132 IPR036869 -
Pte13g00093 715 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 582 - -
Pte13g00093 715 SMART dnaj_3 66 123 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00093 Pte-Chr13 788816 792356 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00093 4 219 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.532 1.07e-21 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00093 - - lang:109332665 575.859