Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00092 ATGGAGTGCAACAAGGATGAGGCTATCAGAGCAAAGCAAATAGCACAACAGAAAATGCGGAGTGGTGATTTTGCTGGGGCATTAAAGATTGCAAAGAGGGCCCAAAAGCTTTTCCCTGATGTTGATAACATTTATCAAGTTCTTACTGTCTGTGAGGTTCATTGTGCTGCAGAAAACAAGCTCCATGGCTTAGAAATGGACTGGTACAGAATCCTTCAGACAGAGCCGTTTGCTGATGTTGCAACAATAAAAAAACAGTACAAGAAGCTAGCTCTCCTGCTTCATCCTGATAAGAACAAGTTTCCCTTTTCCGAGTCTGCTTTCAAACTAGTTGGTGAAGCAAATCAGGTGCTGAGTGACCTATCAAAACGTTCTATATATGACAAGAAGAGTGGACACTTGAAGAGGAACGTTTTCACTCAACAACGACCCAAGGAGCCTAACCGTAGTGCAGATGGTGGAAATCCAGTTGGTCAGTGCGGCGAAGATGGATTCCATCATTCAGATCCTGTCTCAAAAACAAAATGCTCTGTTAACGTCAGTCAGCAATACAGACATGAGAAGAAAGAAAACAAGCATTTCGGTGAGGGAAGCGGCAATGAAAATTTAAGAAGGAACAAATCTGCAGGACCCAAACCCGTATCGCTGAAAAGATGCGCCACTAATAGTGGCGAGAAATCTGAAATGAAGAGGAGGAGAAACACAGTCAACTGCAGCAGGTAA 723 0.4329 MECNKDEAIRAKQIAQQKMRSGDFAGALKIAKRAQKLFPDVDNIYQVLTVCEVHCAAENKLHGLEMDWYRILQTEPFADVATIKKQYKKLALLLHPDKNKFPFSESAFKLVGEANQVLSDLSKRSIYDKKSGHLKRNVFTQQRPKEPNRSADGGNPVGQCGEDGFHHSDPVSKTKCSVNVSQQYRHEKKENKHFGEGSGNENLRRNKSAGPKPVSLKRCATNSGEKSEMKRRRNTVNCSR* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00092 240 SMART dnaj_3 66 123 IPR001623 -
Pte13g00092 240 PANTHER BNAC03G44070D PROTEIN 1 189 - -
Pte13g00092 240 CDD DnaJ 67 120 IPR001623 -
Pte13g00092 240 Gene3D DnaJ domain 64 212 IPR036869 -
Pte13g00092 240 PRINTS DnaJ domain signature 103 123 IPR001623 -
Pte13g00092 240 PRINTS DnaJ domain signature 69 87 IPR001623 -
Pte13g00092 240 PRINTS DnaJ domain signature 87 102 IPR001623 -
Pte13g00092 240 MobiDBLite consensus disorder prediction 223 240 - -
Pte13g00092 240 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Pte13g00092 240 Pfam DnaJ domain 67 128 IPR001623 -
Pte13g00092 240 SUPERFAMILY Chaperone J-domain 62 129 IPR036869 -
Pte13g00092 240 MobiDBLite consensus disorder prediction 132 240 - -
Pte13g00092 240 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Pte13g00092 240 MobiDBLite consensus disorder prediction 182 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00092 Pte-Chr13 783663 786411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00092 4 128 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 41.985 7.33e-24 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00092 - - qsa:O6P43_032208 206.068