Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00086 ATGGCGGTTGACTTGAGTTCTATAGTGTCAAAATTTCAAAATGTATCCACTTCTGATCATGCTTCTGTGGTTGCCATGAACATATTCGTGGCACTCCTCTGTGCTTGCATCGTAATTGGTCATCTCCTTGAGGAGAATCGGTGGATGAATGAATCGATCACTGCTCTTGTAATTGGTCTTGCTACCGGTGTGGTGATTTTGCTGGTCGGTGGGGGTAAATACTTCCATCTTCTGATGTTCAGCGAAGATCTATTCTTTATATACCTTCTTCCACCTATTATATTCAATGCCGGGTTTCAAGTGAAAAAGAAACAGTTTTTTGTCAACTTCATCACTATCGTGCTATTTGGTGCTGTTGGTACTTTAATATCCTGTGCGATTATAAGTTTCGGTGCTACACAGCTTTTTAAGAAGATGAACATTGGGGAACTGGACTTTGGGGATTATCTAGCAATTGGTGCAATATTTGCTGCAACAGATTCTGTATGCACATTGCAGGTGCTAAATCAGGATGAGACACCTTTACTATACAGTCTTGTATTTGGGGAAGGTGTCGTAAACGACGCCACATCTGTAGTGCTTTTCAACGCTATTAAGGGTTTTGACCTCACTAAAGTTGATCACAGGATTGCTTTTCATTTTATTGGCAACTTCATCTACCTGTTTATTTCAAGCACATTACTTGGCGTTGCGGCTGGGCTAGTTAGTGCTTACATTATCAAAAAGCTCTACATTGGCAGGCACTCTACAGATCGTGAAGTTGCTCTTATGGTGCTGATGGCATACCTTTCGTATATGCTGGCTGAACTATGCTACTTGAGTGGCATTCTCACTGTATTCTTTTGCGGGATTGTGATGTCTCACTATACATGGCATAATGTTACCAAGAGTTCAAGAATCACAACAAAGCATACGTTTGCAACCTTGTCATTTGTTGCGGAGACTTTCATCTTCCTTTATGTTGGAATGGATGCCTTGGACATAGAAAAGTGGAAATTTGTTAGTGATAGCCCTGGAACATCTGTTGCGGTTAGTGGCATACTGTTGGGTCTAATTCTAGCTGGAAGAGCTGCCTTTGTGTTCCCCTTGTCTTTTTTATCCAACTTGATTAAAAGCTCTCCACAAGAAAAAATTACGTTAAGACAACAGGTGATAATCTGGTGGGCTGGTCTCATGAGAGGCGCTGTATCAATGGCACTTGCATATAATCAGTTTACTATGTCTGGCTATACTCAACTGAGGTCACATGCTATCATGATCACCAGTACAATAACTGTTGTTCTTTGCAGCACGATGGTTTTTGGTTTGATGACCCAACCTCTCATTAGATTCTTGCTTCCTCATTCAAAACAAACAGCCAGCTTCTTAGTGTCAGATCCACCCAGTCCAAAAACGATGACCATGCCCCTTCTTGCAAGTTCACAGGTGTCGGAATCTGATTTTGATGGGCATGAACCTCCCCGTCCAAGCAGCCTTCGGGAACTTCTTGCTACCCCAGCACATACAGTTCATCGTTATTGGCGTAAGTTTGATGATGCTTTCATGCGACCAGTATTTGGTGGGAGGGGTTTTGTTCCTGAAGCTCCTGGTTCGCCAACTGAACACAGTCAAAATCAGTGGCAATAG 1626 0.4237 MAVDLSSIVSKFQNVSTSDHASVVAMNIFVALLCACIVIGHLLEENRWMNESITALVIGLATGVVILLVGGGKYFHLLMFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFITIVLFGAVGTLISCAIISFGATQLFKKMNIGELDFGDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIKGFDLTKVDHRIAFHFIGNFIYLFISSTLLGVAAGLVSAYIIKKLYIGRHSTDREVALMVLMAYLSYMLAELCYLSGILTVFFCGIVMSHYTWHNVTKSSRITTKHTFATLSFVAETFIFLYVGMDALDIEKWKFVSDSPGTSVAVSGILLGLILAGRAAFVFPLSFLSNLIKSSPQEKITLRQQVIIWWAGLMRGAVSMALAYNQFTMSGYTQLRSHAIMITSTITVVLCSTMVFGLMTQPLIRFLLPHSKQTASFLVSDPPSPKTMTMPLLASSQVSESDFDGHEPPRPSSLRELLATPAHTVHRYWRKFDDAFMRPVFGGRGFVPEAPGSPTEHSQNQWQ* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00086 541 Gene3D - 146 197 - -
Pte13g00086 541 Pfam Sodium/hydrogen exchanger family 28 442 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pte13g00086 541 PANTHER SODIUM/HYDROGEN EXCHANGER 16 520 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Pte13g00086 541 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pte13g00086 541 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pte13g00086 541 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pte13g00086 541 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00086 Pte-Chr13 747064 752375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00086 6 539 Antiporters AT3G05030 75.836 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00086 - - qsa:O6P43_011160 878.241