Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g00084 ATGCTGATATCTGCTGTGGAGGAGCAAATGTCTTTGCCATCTGAGAATATTAATGAGCTTTCAGTTCCACCACAACTGAAACTGAATCCAGATATCCCTGATGGACTGCTACCCTCTGCGGAGTATCTTGACTCTGCACCTTATACAGATGTAGGGGTTGTTCCCGAGCATGAAAAGCACGACCTTGAGCTGTCAATATTGAACGTAGAAGAAGAAATTGGGCAGCTGAGGCTTAAACATAAAGCATTGGATGAGAAGAGAAAAGAAGCATTAAACAAGATATTAGACATCAAAGGTAGCATCCGTGTATTTTGTCGAGTTGGGCCATTTCTTTTAGCTGACAATAGAAGAAGAATCCTTGAACCTGTTTCAACTGAGGCAAATAAAGTTATAGTTAGATCAGGAGGAGCAAGGAAAGAATTTGAATTTGATAATGTTTTTCCTCAAGAAGCACGCCAAGAATTTGTCTTTGATGAGTTAGAACCAATAATCAGATCTGCACTTGATGGACACAATGTTTGTGTCCTTGCTTATGGACAAACAGGCACTGGCAAGACATTTACAATGGAAGGCACAAATGGGCAACCTGGTATTATTCAACGTTCCCTTAAGGAGCTATTTCGTCTAGCCTCTTTGGATTATCCATCGTCCATTTCATTTTCGATAAGCATGCTTGAAGTATACATGGGTAATCTTAGAGATCTTCTGGCTCCAAACTCTCATCATCGAGGAAGTCAATCAGTGACAACATGCAATCTCAACATTCAAACAGATTCTAAGGGATCAGTCGAAATTGAGGGCCTGTCCAAAGTGCAGATTCTGGATTATGATAAAGCTAGATGGTGGTATAACAAGGGTAGGAGGGTGAGATCTACATCTTGGACTAATGTAAACGAAGTTTCTAGCAGATCACACTGGTGGGTTGAGTCCACAGATATTACAAGCTCTTCATGGACACTTAACTTGATACTTACATTACCTGTTTAG 987 0.4053 MLISAVEEQMSLPSENINELSVPPQLKLNPDIPDGLLPSAEYLDSAPYTDVGVVPEHEKHDLELSILNVEEEIGQLRLKHKALDEKRKEALNKILDIKGSIRVFCRVGPFLLADNRRRILEPVSTEANKVIVRSGGARKEFEFDNVFPQEARQEFVFDELEPIIRSALDGHNVCVLAYGQTGTGKTFTMEGTNGQPGIIQRSLKELFRLASLDYPSSISFSISMLEVYMGNLRDLLAPNSHHRGSQSVTTCNLNIQTDSKGSVEIEGLSKVQILDYDKARWWYNKGRRVRSTSWTNVNEVSSRSHWWVESTDITSSSWTLNLILTLPV* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g00084 328 PRINTS Kinesin heavy chain signature 295 312 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte13g00084 328 PRINTS Kinesin heavy chain signature 170 191 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte13g00084 328 Pfam Kinesin motor domain 126 306 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte13g00084 328 PANTHER KINESIN-LIKE PROTEIN KLP-3 62 307 IPR027640 GO:0003777|GO:0007018
Pte13g00084 328 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 308 IPR027417 -
Pte13g00084 328 ProSiteProfiles Kinesin motor domain profile. 100 328 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte13g00084 328 Coils Coil 59 93 - -
Pte13g00084 328 Gene3D Kinesin motor domain 52 317 IPR036961 -
Pte13g00084 328 SMART kinesin_4 98 328 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g00084 Pte-Chr13 739213 741149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g00084 59 317 Calmodulin-binding Proteins AT5G65930 35.075 1.35e-40 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g00084 - - qsa:O6P43_011170 414.846